RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 CYLC1P35663 651 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 PEX19P40855 299 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 PAFAH1B1P43034 410 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 RBM5P52756 815 aaKnown RBP eCLIP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 ARFIP2P53365 341 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 TAP2Q03519 686 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 C2orf54Q08AI8 447 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 MYO1EQ12965 1108 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 MTA1Q13330 715 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 BIRC3Q13489 604 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 LAMB3Q13751 1172 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 EIF4A2Q14240 407 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 HLXQ14774 488 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 PPP1R7Q15435 360 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 GFOD2Q3B7J2 385 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 TBC1D25Q3MII6 688 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 ZIK1Q3SY52 487 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 LONRF3Q496Y0 759 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 LRRC23Q53EV4 343 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 TTC39AQ5SRH9 613 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 CCDC122Q5T0U0 273 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 SLC9C2Q5TAH2 1124 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 AGBL2Q5U5Z8 902 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 GKAP1Q5VSY0 366 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 CYB5RLQ6IPT4 315 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 HIBCHQ6NVY1 386 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 SHC4Q6S5L8 630 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 MTHFD1LQ6UB35 978 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 CCDC149Q6ZUS6 474 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 ARHGAP22Q7Z5H3 698 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 TRIM74Q86UV6 250 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 TRIM73Q86UV7 250 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 IQCKQ8N0W5 287 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 SLC15A4Q8N697 577 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 DNAJC5GQ8N7S2 189 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 VGLL2Q8N8G2 317 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 CCDC63Q8NA47 563 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 MIPOL1Q8TD10 442 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 THOC1Q96FV9 657 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 BICD1Q96G01 975 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 CAPZA3Q96KX2 299 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 CCDC43Q96MW1 224 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 GDAP1L1Q96MZ0 367 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 HAPLN3Q96S86 360 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 SEC62Q99442 399 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 SLF1Q9BQI6 1058 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 APOL5Q9BWW9 433 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 ACTRT3Q9BYD9 372 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 TPSD1Q9BZJ3 242 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 YIPF3Q9GZM5 350 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 TMBIM4Q9HC24 238 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 METTL14Q9HCE5 456 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 HELLSQ9NRZ9 838 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 SAMSN1Q9NSI8 373 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 ZNHIT6Q9NWK9 470 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 PIH1D1Q9NWS0 290 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 ANAPC4Q9UJX5 808 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 MRPS17Q9Y2R5 130 aaKnown RBP4.02□□□□□ -1.77
FOXN3-213ENST00000556916 PLEKHM1Q9Y4G2 1056 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 PCDHGB6Q9Y5F9 930 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 RPS6KL1Q9Y6S9 549 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 MLH3Q9UHC1 1453 aa4.02□□□□□ -1.77
FOXN3-213ENST00000556916 WDR19Q8NEZ3 1342 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 SH3TC1Q8TE82 1336 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 ADGRA2Q96PE1 1338 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 A0A0U1RQJ8 604 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 CCT8L1PA6NM43 557 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 B4DLN1 442 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 E7EWF7 191 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 GCOM1H8Y6P7 765 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-213ENST00000556916 CPLX1O14810 134 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 IFIT3O14879 490 aaKnown RBP4.01□□□□□ -1.77
FOXN3-213ENST00000556916 PPM1DO15297 605 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 PHGDHO43175 533 aaKnown RBP4.01□□□□□ -1.77
FOXN3-213ENST00000556916 TRAPPC3O43617 180 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 FLOT1O75955 427 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 GYPCP04921 128 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 VIMP08670 466 aaKnown RBP4.01□□□□□ -1.77
FOXN3-213ENST00000556916 PAEPP09466 180 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 HOXB7P09629 217 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 EBLN1P0CF75 366 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 ALADP13716 330 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 IDEP14735 1019 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 TCP1P17987 556 aaKnown RBP4.01□□□□□ -1.77
FOXN3-213ENST00000556916 ITGALP20701 1170 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 DRD4P21917 467 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 CTGFP29279 349 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 ALDH3A1P30838 453 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 KRT9P35527 623 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 CCNG1P51959 295 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 SUMO3P55854 103 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-213ENST00000556916 GPSM2P81274 684 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 EIF2B5Q13144 721 aaKnown RBP4.01□□□□□ -1.77
FOXN3-213ENST00000556916 ITGB3BPQ13352 177 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-213ENST00000556916 SNX1Q13596 522 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 CUL3Q13618 768 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 TRIM29Q14134 588 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 GBX1Q14549 363 aa4.01□□□□□ -1.77
FOXN3-213ENST00000556916 ITIH4Q14624 930 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms