RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 DACT1Q9NYF0 836 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 RRN3Q9NYV6 651 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 APEX2Q9UBZ4 518 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 DNAJB4Q9UDY4 337 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ENOPH1Q9UHY7 261 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 SLC12A4Q9UP95 1085 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 DMTF1Q9Y222 760 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 WBP11Q9Y2W2 641 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 TONSLQ96HA7 1378 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 KIAA0556O60303 1618 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 ABHD14A-ACY1A0A1B0GW23 586 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 A0A1W2PQH9 124 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 GMNCA6NCL1 334 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 KRT87PA6NCN2 255 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 ZNF98A6NK75 572 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 B4E1Z4 1266 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 WRBO00258 174 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 SCAMP1O15126 338 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 ACOX3O15254 700 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 MAFKO60675 156 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 KERAO60938 352 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 RSL1D1O76021 490 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 ENDOD1O94919 500 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CFBP00751 764 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 KRT16P08779 473 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 OCM2P0CE71 109 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 OCMP0CE72 109 aaPredicted RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 PIM1P11309 404 aaPredicted RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 POU3F3P20264 500 aaPredicted RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 L1CAMP32004 1257 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CCNFP41002 786 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 MSH2P43246 934 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CPA2P48052 419 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 GATMP50440 423 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 STAT5BP51692 787 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 PEX3P56589 373 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 YWHAEP62258 255 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 GUCY2DQ02846 1103 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 BAMBIQ13145 260 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 MTMR1Q13613 665 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 SPARCL1Q14515 664 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 KCNJ8Q15842 424 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 SGCAQ16586 387 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 PFKFB4Q16877 469 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 SKIDA1Q1XH10 827 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 SPATS1Q496A3 300 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 GPATCH4Q5T3I0 446 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 FOXB2Q5VYV0 432 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 DUPD1Q68J44 220 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 TRMT10CQ7L0Y3 403 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 GLRX5Q86SX6 157 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 MICU3Q86XE3 530 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 TMTC1Q8IUR5 882 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 TBC1D10CQ8IV04 446 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 PHACTR4Q8IZ21 702 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CLYBLQ8N0X4 340 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 KLHL36Q8N4N3 616 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 ZNF321PQ8N8H1 164 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 GMCL1P1Q8NEA9 526 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 RAB3IL1Q8TBN0 382 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 SETD7Q8WTS6 366 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 CYB5D2Q8WUJ1 264 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CHAC2Q8WUX2 184 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 ATP2A3Q93084 1043 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 TMIGD2Q96BF3 282 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 INTS4Q96HW7 963 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 MAGED4Q96JG8 741 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CCDC74BQ96LY2 380 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CAMK1GQ96NX5 476 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 DEPDC7Q96QD5 511 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 XPO6Q96QU8 1125 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 MKRN2Q9H000 416 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 ANKZF1Q9H8Y5 726 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CAB39LQ9H9S4 337 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 FAM114A2Q9NRY5 505 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 EXD2Q9NVH0 621 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 DDX43Q9NXZ2 648 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 PKD2L2Q9NZM6 624 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 STX18Q9P2W9 335 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 GJD2Q9UKL4 321 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 CAPN11Q9UMQ6 739 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 PLAAQ9Y263 795 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 RAXQ9Y2V3 346 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 VWA7Q9Y334 891 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 SAMHD1Q9Y3Z3 626 aaKnown RBP6.33□□□□□ -1.4
TDP1-215ENST00000556498 PCDHA3Q9Y5H8 950 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 MAD1L1Q9Y6D9 718 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 PIAS3Q9Y6X2 628 aa6.33□□□□□ -1.4
TDP1-215ENST00000556498 RTL9Q8NET4 1388 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 WDR33Q9C0J8 1336 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 ILVBLA1L0T0 632 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 ZSCAN5CA6NGD5 496 aaPredicted RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 CAPN8A6NHC0 703 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 USP27XA6NNY8 438 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 A8MX80 341 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 AIM2O14862 343 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 PPM1DO15297 605 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 DENRO43583 198 aaKnown RBP6.32□□□□□ -1.4
TDP1-215ENST00000556498 PRPSAP2O60256 369 aa6.32□□□□□ -1.4
TDP1-215ENST00000556498 TLR5O60602 858 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms