RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 LTFP02788 710 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 AKT2P31751 481 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 PSMC2P35998 433 aaKnown RBP14.37□□□□□ -0.11
ACTN1-219ENST00000556432 ME1P48163 572 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 MXI1P50539 228 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 CNTN1Q12860 1018 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 ISXQ2M1V0 245 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 FOXD4L6Q3SYB3 417 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-219ENST00000556432 AGBL4Q5VU57 503 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 FOXD4L3Q6VB84 417 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-219ENST00000556432 CHSY1Q86X52 802 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 LURAP1LQ8IV03 231 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 AZIN2Q96A70 460 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 ATXN7L3BQ96GX2 97 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 FZD3Q9NPG1 666 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 DNAJC28Q9NX36 388 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 RAB20Q9NX57 234 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 NLGN3Q9NZ94 848 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 SERTAD1Q9UHV2 236 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 SARDHQ9UL12 918 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 NYNRINQ9P2P1 1898 aaKnown RBP14.37□□□□□ -0.11
ACTN1-219ENST00000556432 CPED1A4D0V7 1026 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 RNGTTO60942 597 aaKnown RBP14.36□□□□□ -0.11
ACTN1-219ENST00000556432 PDGFRAP16234 1089 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 GTF2H1P32780 548 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 ZNF542PQ5EBM4 170 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 FOXD4L5Q5VV16 416 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-219ENST00000556432 OR13H1Q8NG92 308 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 FOXD4L4Q8WXT5 416 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-219ENST00000556432 KCTD13Q8WZ19 329 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 FAXDC2Q96IV6 333 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 FCRL2Q96LA5 508 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-219ENST00000556432 SLC46A1Q96NT5 459 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 SERPINB11Q96P15 392 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 ARHGAP9Q9BRR9 750 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 DUSP23Q9BVJ7 150 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 CAAP1Q9H8G2 361 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 USP29Q9HBJ7 922 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 PREBQ9HCU5 417 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 TJP2Q9UDY2 1190 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 TRAF3IP3Q9Y228 551 aa14.36□□□□□ -0.11
ACTN1-219ENST00000556432 TDRD6O60522 2096 aaKnown RBP14.36□□□□□ -0.11
ACTN1-219ENST00000556432 COL12A1Q99715 3063 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 A0A1W2PQU0 124 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 K7ESM1 405 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 NEBLO76041 1014 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 APOEP02649 317 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 RPL13P26373 211 aaKnown RBP14.35□□□□□ -0.11
ACTN1-219ENST00000556432 YWHAEP62258 255 aaKnown RBP14.35□□□□□ -0.11
ACTN1-219ENST00000556432 SULT2A1Q06520 285 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 SRSF1Q07955 248 aaKnown RBP eCLIP14.35□□□□□ -0.11
ACTN1-219ENST00000556432 CDKN3Q16667 212 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 RAP1GAP2Q684P5 730 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 RBM44Q6ZP01 1051 aaKnown RBP14.35□□□□□ -0.11
ACTN1-219ENST00000556432 PTAR1Q7Z6K3 402 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-219ENST00000556432 SCML4Q8N228 414 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 ARL14Q8N4G2 192 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 TMEM145Q8NBT3 493 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 DQX1Q8TE96 717 aaKnown RBP14.35□□□□□ -0.11
ACTN1-219ENST00000556432 CLEC4CQ8WTT0 213 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 IRGQQ8WZA9 623 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 ARRDC3Q96B67 414 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 PAGE5Q96GU1 130 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 MIS12Q9H081 205 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 SLC25A13Q9UJS0 675 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 MAPK8IP1Q9UQF2 711 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 TLR6Q9Y2C9 796 aa14.35□□□□□ -0.11
ACTN1-219ENST00000556432 DOCK9Q9BZ29 2069 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-219ENST00000556432 M0QYV0 167 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 O00370 1275 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 SCAMP1O15126 338 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 STX10O60499 249 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 VDRP11473 427 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 TGM2P21980 687 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 CLDN2P57739 230 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 NFKB2Q00653 900 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 CLN3Q13286 438 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 ZNF177Q13360 481 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-219ENST00000556432 ADAM9Q13443 819 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 CUL2Q13617 745 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 RESP18Q5W5W9 173 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 IGF2-ASQ6U949 168 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 CRTC1Q6UUV9 634 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 ATG14Q6ZNE5 492 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 Q6ZVU0 165 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 EFL1Q7Z2Z2 1120 aaKnown RBP14.34□□□□□ -0.11
ACTN1-219ENST00000556432 CIR1Q86X95 450 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-219ENST00000556432 RNF34Q969K3 372 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 CCDC47Q96A33 483 aaKnown RBP14.34□□□□□ -0.11
ACTN1-219ENST00000556432 FAM149B1Q96BN6 582 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 EEF2KMTQ96G04 330 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 CCNL2Q96S94 520 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-219ENST00000556432 SYNDIG1Q9H7V2 258 aa14.34□□□□□ -0.11
ACTN1-219ENST00000556432 XPO7Q9UIA9 1087 aaKnown RBP14.34□□□□□ -0.11
ACTN1-219ENST00000556432 UBR5O95071 2799 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-219ENST00000556432 BOD1L1Q8NFC6 3051 aa14.33□□□□□ -0.11
ACTN1-219ENST00000556432 DOPEY2Q9Y3R5 2298 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 LY6G6EA0A0G2JKS1 128 aa14.33□□□□□ -0.12
ACTN1-219ENST00000556432 A0A1W2PNU3 283 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms