RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CNTN1Q12860 1018 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TARDBPQ13148 414 aaKnown RBP eCLIP14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PDCLQ13371 301 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SLC12A1Q13621 1099 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MORC3Q14149 939 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PROX2Q3B8N5 592 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 INAVAQ3KP66 663 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CCDC40Q4G0X9 1142 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 HES3Q5TGS1 186 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 NAPEPLDQ6IQ20 393 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 KLHL10Q6JEL2 608 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 FBXL22Q6P050 247 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 C14orf80Q86SX3 495 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ELOA2Q8IYF1 753 aaPredicted RBP14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SLC25A45Q8N413 288 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MFSD2AQ8NA29 543 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 NELFBQ8WX92 580 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SPAG5Q96R06 1193 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CPXM1Q96SM3 734 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 FEM1AQ9BSK4 669 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 THAP9Q9H5L6 903 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PRORYQ9H606 182 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ANLNQ9NQW6 1124 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CA5BQ9Y2D0 317 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RAI2Q9Y5P3 530 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 FLNBO75369 2602 aaKnown RBP14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3DA0A087WVF3 549 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3IA0A087WXS9 549 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3EA0A087X179 549 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3KA0A087X1G2 549 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 A0A1B0GVM2 712 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3FA6NER0 549 aaPredicted RBP14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TCAF2A6NFQ2 919 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3LB9A6J9 549 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TRIM38O00635 465 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 LETM1O95202 739 aaPredicted RBP14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MOCS3O95396 460 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 APOEP02649 317 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PRB1P04280 392 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CTSLP07711 333 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3HP0C7X1 549 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MAT2AP31153 395 aaKnown RBP14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 GGCXP38435 758 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 EIF2S3P41091 472 aaKnown RBP14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SFSWAPQ12872 951 aaKnown RBP14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 C5orf22Q49AR2 442 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3GQ6DHY5 549 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3CQ6IPX1 549 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TRIM69Q86WT6 500 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TBC1D3Q8IZP1 549 aaPredicted RBP14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PIP4K2CQ8TBX8 421 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RFFLQ8WZ73 363 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CCDC34Q96HJ3 373 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.78□□□□□ -0.045e-8■■■■□ 25.5
CHMP4BP1-201ENST00000556017 AJAP1Q9UKB5 411 aaPredicted RBP14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TRPM6Q9BX84 2022 aa14.78□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CHD5Q8TDI0 1954 aa14.77□□□□□ -0.04
CHMP4BP1-201ENST00000556017 F5H5T6 163 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 CAPN9O14815 690 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 YKT6O15498 198 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 MT-CO1P00395 513 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 KRT5P13647 590 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 JUPP14923 745 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 STX17P56962 302 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 POM121L1PQ3SYA9 428 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 PIP5KL1Q5T9C9 394 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 Q6ZVU0 165 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 IQCHQ86VS3 1027 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 ZNF683Q8IZ20 524 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 DEFB106AQ8N104 65 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 TMEM145Q8NBT3 493 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 NXPE2Q96DL1 559 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 PSMB7Q99436 277 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 GTPBP4Q9BZE4 634 aaKnown RBP14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 KDM4CQ9H3R0 1056 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 UBE2TQ9NPD8 197 aaPredicted RBP14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 TPX2Q9ULW0 747 aaKnown RBP14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 CTNND2Q9UQB3 1225 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 CEP83Q9Y592 693 aa14.77□□□□□ -0.05
CHMP4BP1-201ENST00000556017 ZNF462Q96JM2 2506 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 MCF2LO15068 1137 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 SLC7A4O43246 635 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 SDC3O75056 442 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 GRAP2O75791 330 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 AFPP02771 609 aaKnown RBP14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 CKMT2P17540 419 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 TFE3P19532 575 aaPredicted RBP14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 ACP1P24666 158 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 GNA15P30679 374 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 ABCG1P45844 678 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 ARRB1P49407 418 aaPredicted RBP14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 INSM1Q01101 510 aaPredicted RBP14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 SEMG2Q02383 582 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 SULT2A1Q06520 285 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 AUHQ13825 339 aaKnown RBP14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 DLG2Q15700 870 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 RNF219Q5W0B1 726 aaPredicted RBP14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 PCSK4Q6UW60 755 aa14.76□□□□□ -0.05
CHMP4BP1-201ENST00000556017 OLFML1Q6UWY5 402 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms