RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TFDP2Q14188 446 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 LBRQ14739 615 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PDK2Q15119 407 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 LLGL1Q15334 1064 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 TRADDQ15628 312 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 MAPRE1Q15691 268 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 LPAL2Q16609 132 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CCDC14Q49A88 953 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 NOMO2Q5JPE7 1267 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 SPDYCQ5MJ68 293 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 KAZNQ674X7 775 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 KIAA1211LQ6NV74 962 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 SCYL2Q6P3W7 929 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 DRICH1Q6PGQ1 229 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 SYCE2Q6PIF2 218 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FIGNL1Q6PIW4 674 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 OLFML1Q6UWY5 402 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 MFSD7Q6UXD7 560 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ZNF574Q6ZN55 896 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CCDC81Q6ZN84 652 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CEP128Q6ZU80 1094 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 SLC26A9Q7LBE3 791 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 GSTA5Q7RTV2 222 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PIGZQ86VD9 579 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 DDX42Q86XP3 938 aaKnown RBP eCLIP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ZDHHC14Q8IZN3 488 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FUKQ8N0W3 1084 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 SIX6OS1Q8N1H7 587 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FIBCD1Q8N539 461 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CCDC89Q8N998 374 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CMASQ8NFW8 434 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 OR6P1Q8NGX9 317 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 MYCBPAPQ8TBZ2 947 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FAM71BQ8TC56 605 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 KCTD13Q8WZ19 329 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 RAPGEF5Q92565 580 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 APBB2Q92870 758 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CCDC114Q96M63 670 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FAM193BQ96PV7 902 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 TBCBQ99426 244 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FMO2Q99518 471 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 LPIN3Q9BQK8 851 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ACBD6Q9BR61 282 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 C11orf84Q9BUA3 381 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 BHLHE41Q9C0J9 482 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ELAC1Q9H777 363 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 NGRNQ9NPE2 291 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 DZANK1Q9NVP4 752 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 KLHL11Q9NVR0 708 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 WHRNQ9P202 907 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ZFATQ9P243 1243 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ASIC3Q9UHC3 531 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PCSK1NQ9UHG2 260 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PPT2Q9UMR5 302 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 SIT1Q9Y3P8 196 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 USP9YO00507 2555 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PLXNA4Q9HCM2 1894 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 M0QZQ0 153 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 TULP2O00295 520 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 LIASO43766 372 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ATP2C2O75185 946 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 GRAP2O75791 330 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 CSPG5O95196 566 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 FAM153BP0C7A2 387 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 KRT10P13645 584 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ATF2P15336 505 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 TCF4P15884 667 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 FLT3P36888 993 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ADCY8P40145 1251 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 MATKP42679 507 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 KCNJ1P48048 391 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 GIPRP48546 466 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 NRIP1P48552 1158 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 SMCPP49901 116 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 AFF1P51825 1210 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 PLTPP55058 493 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 YWHAZP63104 245 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 FAM193AP78312 1265 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ATP11AP98196 1134 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 TSPY1Q01534 308 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 PLAURQ03405 335 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 KRT17Q04695 432 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 SFSWAPQ12872 951 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 IFRD2Q12894 506 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 BYSLQ13895 437 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 UBAP2LQ14157 1087 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 KRT81Q14533 505 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 SLMAPQ14BN4 828 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 TAZQ16635 292 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 FAM153CQ494X1 144 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 OVOS1Q6IE37 1185 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 MRPL14Q6P1L8 145 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 LRIG3Q6UXM1 1119 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 BBS12Q6ZW61 710 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 RBM23Q86U06 439 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 RTN4RL1Q86UN2 441 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 VSIG1Q86XK7 387 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 RFX6Q8HWS3 928 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ABI1Q8IZP0 508 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms