RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RFC1P35251 1148 aaPredicted RBP15.97■□□□□ 0.15
SYNE3-203ENST00000554873 NUDT2P50583 147 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 ATP6V0D1P61421 351 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 TRAF2Q12933 501 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 NFATC3Q12968 1075 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 KLF10Q13118 480 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 SELENBP1Q13228 472 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 XKR3Q5GH77 459 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 TTC23LQ6PF05 361 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 IGDCC3Q8IVU1 814 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 UNC45BQ8IWX7 931 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 TNIP2Q8NFZ5 429 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 TFAP2BQ92481 460 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 ADGRA2Q96PE1 1338 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 A0A1W2PQ67 120 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 KBTBD13C9JR72 458 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 ASS1P00966 412 aaKnown RBP15.96■□□□□ 0.15
SYNE3-203ENST00000554873 VDRP11473 427 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 CRHR1P34998 444 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 SLC1A6P48664 564 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 MS4A2Q01362 244 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 ZNF618Q5T7W0 954 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 USP43Q70EL4 1123 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 ELMOD1Q8N336 334 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 RSAD2Q8WXG1 361 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 KLHL32Q96NJ5 620 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 XPO7Q9UIA9 1087 aaKnown RBP15.96■□□□□ 0.15
SYNE3-203ENST00000554873 VWA5AO00534 786 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 RGS13O14921 159 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 ENO2P09104 434 aaPredicted RBP15.96■□□□□ 0.15
SYNE3-203ENST00000554873 ZNF182P17025 639 aaPredicted RBP15.96■□□□□ 0.15
SYNE3-203ENST00000554873 IFITM2Q01629 132 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 PMS2P3Q13401 168 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 RAB39AQ14964 217 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 KIAA0319LQ8IZA0 1049 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 PPM1NQ8N819 430 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 KYQ8NBH2 561 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 PDPRQ8NCN5 879 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 ATG4CQ96DT6 458 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 HERC2P3Q9BVR0 1158 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 PORCNQ9H237 461 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 RPAP3Q9H6T3 665 aaPredicted RBP15.96■□□□□ 0.15
SYNE3-203ENST00000554873 RABL2BQ9UNT1 228 aa15.96■□□□□ 0.15
SYNE3-203ENST00000554873 PLOD2O00469 737 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 AIM2O14862 343 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 GUCY1B2O75343 617 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 GCATO75600 419 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 ITGBL1O95965 494 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-203ENST00000554873 PSMA2P25787 234 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 MYL6P60660 151 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 SLC25A11Q02978 314 aaKnown RBP15.95■□□□□ 0.14
SYNE3-203ENST00000554873 TAP1Q03518 808 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 FASTKD1Q53R41 847 aaKnown RBP15.95■□□□□ 0.14
SYNE3-203ENST00000554873 BBS12Q6ZW61 710 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 CTAGE3PQ8IX95 158 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 CISHQ9NSE2 258 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 KDELR1P24390 212 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 TNFSF9P41273 254 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 NRLP54845 237 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 TGFB2P61812 414 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 DGKDQ16760 1214 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 Q3C1V9 767 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 FAM47CQ5HY64 1035 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 MBLAC2Q68D91 279 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 TTC33Q6PID6 262 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-203ENST00000554873 POLNQ7Z5Q5 900 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 DSELQ8IZU8 1212 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 ZNF786Q8N393 782 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 JOSD2Q8TAC2 188 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 SMARCAD1Q9H4L7 1026 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 MOV10Q9HCE1 1003 aaKnown RBP15.95■□□□□ 0.14
SYNE3-203ENST00000554873 PNPLA8Q9NP80 782 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 TJP2Q9UDY2 1190 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 TRIM64A6NGJ6 449 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 HTRA2O43464 458 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-203ENST00000554873 LRCH4O75427 683 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 CLPXO76031 633 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 CCNA2P20248 432 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 ME2P23368 584 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 MSX2P35548 267 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-203ENST00000554873 NAMPTP43490 491 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 TPTEP56180 551 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 LRRC49Q8IUZ0 686 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 NDUFAF2Q8N183 169 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 TMCO5AQ8N6Q1 288 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 FAM71DQ8N9W8 422 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 FLAD1Q8NFF5 587 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 ZNF518BQ9C0D4 1074 aa15.95■□□□□ 0.14
SYNE3-203ENST00000554873 ZNF839A8K0R7 811 aa15.94■□□□□ 0.14
SYNE3-203ENST00000554873 TTC34A8MYJ7 566 aa15.94■□□□□ 0.14
SYNE3-203ENST00000554873 CENPBD1B2RD01 187 aa15.94■□□□□ 0.14
SYNE3-203ENST00000554873 ZBTB14O43829 449 aa15.94■□□□□ 0.14
SYNE3-203ENST00000554873 BCL10O95999 233 aa15.94■□□□□ 0.14
SYNE3-203ENST00000554873 RPL10P27635 214 aaKnown RBP15.94■□□□□ 0.14
SYNE3-203ENST00000554873 MAP4P27816 1152 aaKnown RBP15.94■□□□□ 0.14
SYNE3-203ENST00000554873 ARL2P36404 184 aa15.94■□□□□ 0.14
SYNE3-203ENST00000554873 CEACAM7Q14002 265 aa15.94■□□□□ 0.14
SYNE3-203ENST00000554873 ZBTB46Q86UZ6 589 aa15.94■□□□□ 0.14
SYNE3-203ENST00000554873 ZC3H7AQ8IWR0 971 aaKnown RBP15.94■□□□□ 0.14
SYNE3-203ENST00000554873 NSUN6Q8TEA1 469 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms