RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ERVK-11Q9UQG0 969 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 URB2Q14146 1524 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 STK36Q9NRP7 1315 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 KIAA2026Q5HYC2 2103 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 A0A087WZ62 844 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CCDC151A5D8V7 595 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 KPNA7A9QM74 516 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 O00370 1275 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 HSD17B3P37058 310 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 NAE1Q13564 534 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ALG1LQ6GMV1 187 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TOGARAM2Q6ZUX3 1019 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 IGFN1Q86VF2 1251 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RIBC1Q8N443 379 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RAD51AP1Q96B01 352 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 LRRC58Q96CX6 371 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FDXACB1Q9BRP7 624 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 NT5C3AQ9H0P0 336 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PLSCR3Q9NRY6 295 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CORO2BQ9UQ03 480 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 NPHP4O75161 1426 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TPST2O60704 377 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 NR3C1P04150 777 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DBTP11182 482 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PTGER1P34995 402 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CDH15P55291 814 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 IL5RAQ01344 420 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF155Q12901 538 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 LMNTD1Q8N9Z9 388 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 BRF2Q9HAW0 419 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM165Q9HC07 324 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF225Q9UK10 706 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DAGLAQ9Y4D2 1042 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SMCO3A2RU48 225 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 BTBD19C9JJ37 291 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TNFRSF21O75509 655 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 COL6A1P12109 1028 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PLK1P53350 603 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 AP2S1P53680 142 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RAB25P57735 213 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF423Q2M1K9 1284 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 POTEAQ6S8J7 498 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DEF8Q6ZN54 512 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GOLGA2P5Q9HBQ8 144 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MYOZ2Q9NPC6 264 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DOCK11Q5JSL3 2073 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 KHDRBS3O75525 346 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GH1P01241 217 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 IL1R1P14778 569 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MSH3P20585 1137 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CD72P21854 359 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PSMB9P28065 219 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GRK4P32298 578 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM132DQ14C87 1099 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF671Q8TAW3 534 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PNPT1Q8TCS8 783 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CKAP2Q8WWK9 683 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CPT1BQ92523 772 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 WDR11Q9BZH6 1224 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MINPP1Q9UNW1 487 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 NCKAP1Q9Y2A7 1128 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TRPM6Q9BX84 2022 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D4O60343 1298 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 JCHAINP01591 159 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PRKAR2AP13861 404 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TTKP33981 857 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PRKCEQ02156 737 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GPRIN1Q7Z2K8 1008 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SUGP1Q8IWZ8 645 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GPRC5AQ8NFJ5 357 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MICU1Q9BPX6 476 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MCMBPQ9BTE3 642 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PHACTR1Q9C0D0 580 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SAE1Q9UBE0 346 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PLCL2Q9UPR0 1127 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TAF6LQ9Y6J9 622 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 KDM5AP29375 1690 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GXYLT2A0PJZ3 443 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 F5H5T6 163 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 IL1BP01584 269 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PGM1P36871 562 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PKN1Q16512 942 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ATP13A4Q4VNC1 1196 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GPAT3Q53EU6 434 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CYP20A1Q6UW02 462 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CCDC71Q8IV32 467 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DCUN1D5Q9BTE7 237 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 WDR41Q9HAD4 459 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM5Q9Y2B1 443 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PMF1-BGLAPU3KQ54 211 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ABCA7Q8IZY2 2146 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 IBTKQ9P2D0 1353 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 F8W8V4 182 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 USP1O94782 785 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CYP4B1P13584 511 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FXR2P51116 673 aaKnown RBP eCLIP3.36□□□□□ -1.872e-6■■■■■ 27
SYNE2-212ENST00000554584 SARM1Q6SZW1 724 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PRSS55Q6UWB4 352 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SEZ6L2Q6UXD5 910 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF761Q86XN6 746 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms