RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 NET1Q7Z628 596 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 TOP6BLQ8N6T0 577 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 RBBP8Q99708 897 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 NAT9Q9BTE0 207 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 SIK2Q9H0K1 926 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 SLC39A10Q9ULF5 831 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 CORO1CQ9ULV4 474 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 MBLAC1A4D2B0 266 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 AP2A1O95782 977 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 LINGO3P0C6S8 592 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 CD68P34810 354 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 SPRP35270 261 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 CLCNKBP51801 687 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 DAOAP59103 153 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 CDC42EP1Q00587 391 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 ANKRD20A4Q4UJ75 823 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 GRTP1Q5TC63 336 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 FAM35AQ86V20 835 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 PHTF2Q8N3S3 785 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 NT5C3BQ969T7 300 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 SLC2A13Q96QE2 648 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 MLPHQ9BV36 600 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 TKTL2Q9H0I9 626 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 WDR6Q9NNW5 1121 aaKnown RBP16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 FLRT1Q9NZU1 646 aa16.02■□□□□ 0.16
ARHGEF40-203ENST00000554514 KIF1CO43896 1103 aaKnown RBP16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 SERPINB8P50452 374 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 COPAP53621 1224 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 CUL3Q13618 768 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZRSR2Q15696 482 aaKnown RBP16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 CCL14Q16627 93 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 RABGAP1LQ5R372 815 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 PDZD4Q76G19 769 aaPredicted RBP16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 KCNMB4Q86W47 210 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 PAAF1Q9BRP4 392 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 ANGPTL2Q9UKU9 493 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 BRCA2P51587 3418 aa16.02■□□□□ 0.15
ARHGEF40-203ENST00000554514 A0A088AWK7 358 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 DFFAO00273 331 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 LTFP02788 710 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 UBTFL6P0CB48 400 aaPredicted RBP16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 NMBRP28336 390 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 AXLP30530 894 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 TRMT5Q32P41 509 aaKnown RBP16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 TCHHL1Q5QJ38 904 aaPredicted RBP16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 SPNS2Q8IVW8 549 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 HASPINQ8TF76 798 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 WDCPQ9H6R7 721 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 OR12D3Q9UGF7 316 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 DOCK3Q8IZD9 2030 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZCWPW2A0A1B0GU75 182 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 PHGDHO43175 533 aaKnown RBP16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 AOC1P19801 751 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 CPOXP36551 454 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 ACTR3P61158 418 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 SLC9B1Q4ZJI4 515 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 IZUMO2Q6UXV1 221 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 SLC26A7Q8TE54 656 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 COG4Q9H9E3 785 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 NDE1Q9NXR1 346 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZNF212Q9UDV6 495 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 CD1EP15812 388 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 GRK2P25098 689 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 LIMK2P53671 638 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 AP2B1P63010 937 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 MPP3Q13368 585 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 TBCCQ15814 346 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 ARHGAP36Q6ZRI8 547 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 EGFL6Q8IUX8 553 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 SPATA6LQ8N4H0 392 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 C3orf58Q8NDZ4 430 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 SPATA22Q8NHS9 363 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 URGCPQ8TCY9 931 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZC3H15Q8WU90 426 aaKnown RBP16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 APBA2Q99767 749 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 COLEC11Q9BWP8 271 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 LRCH1Q9Y2L9 728 aa16.01■□□□□ 0.15
ARHGEF40-203ENST00000554514 A6NHS1 94 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 KLHL2O95198 593 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 C2P06681 752 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 MRPS35P82673 323 aaKnown RBP16■□□□□ 0.15
ARHGEF40-203ENST00000554514 ARL13BQ3SXY8 428 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 STXBP5Q5T5C0 1151 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 DEFB107AQ8IZN7 70 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 KCTD13Q8WZ19 329 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 SCYL1Q96KG9 808 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZNF184Q99676 751 aaPredicted RBP16■□□□□ 0.15
ARHGEF40-203ENST00000554514 PTPN18Q99952 460 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 DDX50Q9BQ39 737 aaKnown RBP16■□□□□ 0.15
ARHGEF40-203ENST00000554514 TASP1Q9H6P5 420 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 MIOSQ9NXC5 875 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 FBXW11Q9UKB1 542 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 GNEQ9Y223 722 aaKnown RBP16■□□□□ 0.15
ARHGEF40-203ENST00000554514 C17orf102A2RUQ5 167 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 ENO4A6NNW6 628 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms