RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 EPAS1Q99814 870 aa23.87■■□□□ 1.41
NEK9-203ENST00000553945 NCAPGQ9BPX3 1015 aa23.87■■□□□ 1.41
NEK9-203ENST00000553945 SPON2Q9BUD6 331 aa23.87■■□□□ 1.41
NEK9-203ENST00000553945 PACSIN1Q9BY11 444 aa23.87■■□□□ 1.41
NEK9-203ENST00000553945 IP6K2Q9UHH9 426 aa23.87■■□□□ 1.41
NEK9-203ENST00000553945 GMEB2Q9UKD1 530 aa23.87■■□□□ 1.41
NEK9-203ENST00000553945 AP4E1Q9UPM8 1137 aa23.87■■□□□ 1.41
NEK9-203ENST00000553945 NEU3Q9UQ49 428 aa23.87■■□□□ 1.41
NEK9-203ENST00000553945 A0A0D9SEW6 157 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 ILVBLA1L0T0 632 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 MAP3K13O43283 966 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 LRCH4O75427 683 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 EPHB2P29323 1055 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 PIGHQ14442 188 aaPredicted RBP23.86■■□□□ 1.41
NEK9-203ENST00000553945 ACAP1Q15027 740 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 ELF2Q15723 593 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 HNRNPA1L2Q32P51 320 aaKnown RBP23.86■■□□□ 1.41
NEK9-203ENST00000553945 ERMARDQ5T6L9 678 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 DAB2IPQ5VWQ8 1189 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 ZNF783Q6ZMS7 281 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 NLRP14Q86W24 1093 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 OR7D4Q8NG98 312 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 ZC3H10Q96K80 434 aaKnown RBP23.86■■□□□ 1.41
NEK9-203ENST00000553945 PSMB7Q99436 277 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 SNRNP25Q9BV90 132 aaKnown RBP23.86■■□□□ 1.41
NEK9-203ENST00000553945 C2orf49Q9BVC5 232 aaPredicted RBP23.86■■□□□ 1.41
NEK9-203ENST00000553945 DUSP15Q9H1R2 295 aaPredicted RBP23.86■■□□□ 1.41
NEK9-203ENST00000553945 DHX35Q9H5Z1 703 aaKnown RBP23.86■■□□□ 1.41
NEK9-203ENST00000553945 RETREG1Q9H6L5 497 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 CTTNBP2NLQ9P2B4 639 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 DNAI1Q9UI46 699 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 CYP8B1Q9UNU6 501 aa23.86■■□□□ 1.41
NEK9-203ENST00000553945 SNAP91O60641 907 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 SIN3BO75182 1162 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 ZNF217O75362 1048 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 RHOBTB1O94844 696 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 MAPKAPK2P49137 400 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 DCLK2Q8N568 766 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 ZNF564Q8TBZ8 553 aaPredicted RBP23.85■■□□□ 1.41
NEK9-203ENST00000553945 FBRSQ9HAH7 460 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 NDFIP2Q9NV92 336 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 TMEM248Q9NWD8 314 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 VPS51Q9UID3 782 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 MBD1Q9UIS9 605 aaPredicted RBP23.85■■□□□ 1.41
NEK9-203ENST00000553945 USP18Q9UMW8 372 aa23.85■■□□□ 1.41
NEK9-203ENST00000553945 PLXND1Q9Y4D7 1925 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 EDDM13A0A1B0GTR0 161 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 MYO1FO00160 1098 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 TMEM253P0C7T8 217 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 ACADMP11310 421 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 PCK1P35558 622 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 GNA12Q03113 381 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 SEMA3BQ13214 749 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 CA9Q16790 459 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 ACCSLQ4AC99 568 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 DCAF4L2Q8NA75 395 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 ATP13A1Q9HD20 1204 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 CD93Q9NPY3 652 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 UVRAGQ9P2Y5 699 aa23.84■■□□□ 1.41
NEK9-203ENST00000553945 IGHV1OR15-9A0A0B4J2B8 117 aa23.83■■□□□ 1.41
NEK9-203ENST00000553945 TARSL2A2RTX5 802 aaKnown RBP23.83■■□□□ 1.41
NEK9-203ENST00000553945 RETP07949 1114 aa23.83■■□□□ 1.41
NEK9-203ENST00000553945 GLDCP23378 1020 aa23.83■■□□□ 1.41
NEK9-203ENST00000553945 TPI1P60174 286 aa23.83■■□□□ 1.41
NEK9-203ENST00000553945 C9orf64Q5T6V5 341 aa23.83■■□□□ 1.41
NEK9-203ENST00000553945 IL31Q6EBC2 164 aa23.83■■□□□ 1.41
NEK9-203ENST00000553945 CYP4V2Q6ZWL3 525 aaPredicted RBP23.83■■□□□ 1.41
NEK9-203ENST00000553945 METTL3Q86U44 580 aaKnown RBP23.83■■□□□ 1.41
NEK9-203ENST00000553945 NIPA2Q8N8Q9 360 aa23.83■■□□□ 1.41
NEK9-203ENST00000553945 CATSPERBQ9H7T0 1116 aa23.83■■□□□ 1.41
NEK9-203ENST00000553945 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 CBX4O00257 560 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 ATP9BO43861 1147 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 VAV1P15498 845 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 TCF4P15884 667 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 ACVRL1P37023 503 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 VASPP50552 380 aaPredicted RBP23.82■■□□□ 1.4
NEK9-203ENST00000553945 RPS14P62263 151 aaKnown RBP23.82■■□□□ 1.4
NEK9-203ENST00000553945 DLG2Q15700 870 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 PPP6R3Q5H9R7 873 aaPredicted RBP23.82■■□□□ 1.4
NEK9-203ENST00000553945 PMS2CLQ68D20 193 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 LINGO4Q6UY18 593 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 SLC36A4Q6YBV0 504 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 LPCAT2Q7L5N7 544 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 PSTKQ8IV42 348 aaKnown RBP23.82■■□□□ 1.4
NEK9-203ENST00000553945 TMEFF1Q8IYR6 380 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 SH2D3CQ8N5H7 860 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 RTL3Q8N8U3 475 aaKnown RBP23.82■■□□□ 1.4
NEK9-203ENST00000553945 ATP11CQ8NB49 1132 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 LOXL4Q96JB6 756 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 KCTD15Q96SI1 283 aaPredicted RBP23.82■■□□□ 1.4
NEK9-203ENST00000553945 RSPH9Q9H1X1 276 aaPredicted RBP23.82■■□□□ 1.4
NEK9-203ENST00000553945 ZWILCHQ9H900 591 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 ITM2CQ9NQX7 267 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 USP36Q9P275 1121 aaKnown RBP23.82■■□□□ 1.4
NEK9-203ENST00000553945 SPAG17Q6Q759 2223 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 THADAQ6YHU6 1953 aa23.82■■□□□ 1.4
NEK9-203ENST00000553945 NYNRINQ9P2P1 1898 aaKnown RBP23.81■■□□□ 1.4
NEK9-203ENST00000553945 EIF3CLB5ME19 914 aaKnown RBP23.81■■□□□ 1.4
NEK9-203ENST00000553945 EEF2KO00418 725 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms