RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 LRRC27Q9C0I9 530 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 CISHQ9NSE2 258 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 CREBBPQ92793 2442 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 CELSR2Q9HCU4 2923 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 CRYBG3Q68DQ2 2970 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 PVALEFA0A1B0GWK0 134 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 EME2A4GXA9 379 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 RNF103O00237 685 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 NEBLO76041 1014 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 LUC7L3O95232 432 aaKnown RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 IL1BP01584 269 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 NR3C1P04150 777 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 FAM87AP0C7U9 286 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 TRIM49P0CI25 452 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 TRIM49CP0CI26 452 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 PRLRP16471 622 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 WT1P19544 449 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 GCLMP48507 274 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 CEBPZQ03701 1054 aaKnown RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 ENPEPQ07075 957 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 CUL4AQ13619 759 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 CUL4BQ13620 913 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 STAT4Q14765 748 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 GOLGA7BQ2TAP0 167 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 SETMARQ53H47 684 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 DCAF6Q58WW2 860 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 PERM1Q5SV97 790 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 NUGGCQ68CJ6 796 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 UBR7Q8N806 425 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 LINC00301Q8NCQ3 95 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 ZNF548Q8NEK5 533 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 MAPK15Q8TD08 544 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 KCTD13Q8WZ19 329 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 EXTL1Q92935 676 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 DHX58Q96C10 678 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 ALG14Q96F25 216 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 KLHDC7BQ96G42 594 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 RPL10LQ96L21 214 aaKnown RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 HEXIM2Q96MH2 286 aaKnown RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 PSMG3-AS1Q96PY0 264 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 BLZF1Q9H2G9 400 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 MAGEF1Q9HAY2 307 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 PREBQ9HCU5 417 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 ABCC13Q9NSE7 274 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 IGSF5Q9NSI5 407 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 STIM2Q9P246 746 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 XPO7Q9UIA9 1087 aaKnown RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 PCDHGA7Q9Y5G6 932 aa9.36□□□□□ -0.91
PRKCH-208ENST00000553846 HEMK1Q9Y5R4 338 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-208ENST00000553846 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 VPS37CA5D8V6 355 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 O00370 1275 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 NTN3O00634 580 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 PDXKO00764 312 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 ATP9BO43861 1147 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 TCEA3O75764 348 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 CTSLP07711 333 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 TRIM21P19474 475 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 RBMS1P29558 406 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 FBN2P35556 2912 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 SLC11A2P49281 568 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 VAMP7P51809 220 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 PLK1P53350 603 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 AMPD3Q01432 767 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 TLE1Q04724 770 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 BST2Q10589 180 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 ZNF177Q13360 481 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 NNTQ13423 1086 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 EIF4EBP2Q13542 120 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 CDH18Q13634 790 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 UBAP2LQ14157 1087 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 FGL2Q14314 439 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 FZD2Q14332 565 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 DRAP1Q14919 205 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 POM121L1PQ3SYA9 428 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 TMEM259Q4ZIN3 620 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 TPRG1LQ5T0D9 272 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 CXorf57Q6NSI4 855 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 ZCCHC8Q6NZY4 707 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 RBM44Q6ZP01 1051 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 UNC45BQ8IWX7 931 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 CFAP52Q8N1V2 620 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 RNF139Q8WU17 664 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 HTR3CQ8WXA8 447 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 ARRDC3Q96B67 414 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 SGF29Q96ES7 293 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 LIN37Q96GY3 246 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 ZSWIM1Q9BR11 485 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 FUCA2Q9BTY2 467 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 BOCQ9BWV1 1114 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 TRPM6Q9BX84 2022 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 OSBPL2Q9H1P3 480 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 FZD3Q9NPG1 666 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 CNGB3Q9NQW8 809 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 TSPAN16Q9UKR8 245 aa9.35□□□□□ -0.91
PRKCH-208ENST00000553846 ZFR2Q9UPR6 939 aaKnown RBP9.35□□□□□ -0.91
PRKCH-208ENST00000553846 TRAF3IP3Q9Y228 551 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms