RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FBXO21O94952 628 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 APOEP02649 317 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 MYF5P13349 255 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 PRLRP16471 622 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 DGKAP23743 735 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 TBXAS1P24557 533 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-209ENST00000553308 NNMTP40261 264 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 TMPRSS3P57727 454 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 TAS2R38P59533 333 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 PITX1P78337 314 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-209ENST00000553308 RHDQ02161 417 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 LY6DQ14210 128 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 CNGA2Q16280 664 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 SETMARQ53H47 684 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-209ENST00000553308 ZC3H12AQ5D1E8 599 aaKnown RBP9.36□□□□□ -0.91
SYNE2-209ENST00000553308 BROXQ5VW32 411 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 CDCP2Q5VXM1 449 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 SYPL2Q5VXT5 272 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 KRBA2Q6ZNG9 492 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 TMC6Q7Z403 805 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 CCAR2Q8N163 923 aaKnown RBP9.36□□□□□ -0.91
SYNE2-209ENST00000553308 TMEM145Q8NBT3 493 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 OR4C6Q8NH72 309 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 OR8D1Q8WZ84 308 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 KLK6Q92876 244 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 SLC35C1Q96A29 364 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 KLHDC7BQ96G42 594 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 HSFY1Q96LI6 401 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 ZNF578Q96N58 590 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-209ENST00000553308 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYNE2-209ENST00000553308 KDM4CQ9H3R0 1056 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 FZD3Q9NPG1 666 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 TJP2Q9UDY2 1190 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 PCDHB4Q9Y5E5 795 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 ZNF462Q96JM2 2506 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 LY6G6EA0A0G2JKS1 128 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 FAM237AA0A1B0GTK4 181 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 CAPN8A6NHC0 703 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 F5H5T6 163 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 SLC16A3O15427 465 aaKnown RBP9.35□□□□□ -0.91
SYNE2-209ENST00000553308 SLC31A1O15431 190 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 USP12O75317 370 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 CSO75390 466 aaKnown RBP9.35□□□□□ -0.91
SYNE2-209ENST00000553308 PIAS2O75928 621 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 DXOO77932 396 aaKnown RBP9.35□□□□□ -0.91
SYNE2-209ENST00000553308 THEGLP0DJG4 465 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 GIMD1P0DJR0 217 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 CKMT1AP12532 417 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 NUDT1P36639 197 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 IRAK1P51617 712 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
SYNE2-209ENST00000553308 CENPCQ03188 943 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 KCNMA1Q12791 1236 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 ACCSLQ4AC99 568 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 HS1BP3Q53T59 392 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 FAM46CQ5VWP2 391 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 CXorf57Q6NSI4 855 aaKnown RBP9.35□□□□□ -0.91
SYNE2-209ENST00000553308 Q6ZVU0 165 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 DSG4Q86SJ6 1040 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 PPM1KQ8N3J5 372 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 OR52K2Q8NGK3 314 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 KCNE4Q8WWG9 221 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 TTC9Q92623 222 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 BTN2A3PQ96KV6 586 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 SPATA32Q96LK8 384 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 NOX5Q96PH1 765 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 DEPDC7Q96QD5 511 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 PRMT1Q99873 361 aaKnown RBP9.35□□□□□ -0.91
SYNE2-209ENST00000553308 CALN1Q9BXU9 219 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 GOLPH3LQ9H4A5 285 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 ASCL3Q9NQ33 180 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 ST7Q9NRC1 585 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 PPM1HQ9ULR3 514 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 U3KQA8 63 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 KALRNO60229 2985 aa9.35□□□□□ -0.91
SYNE2-209ENST00000553308 COL27A1Q8IZC6 1860 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-209ENST00000553308 A0A1W2PQU0 124 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 TCAF2A6NFQ2 919 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 C1QTNF3-AMACRE9PGA6 284 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 KLK10O43240 276 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 SART1O43290 800 aaKnown RBP9.34□□□□□ -0.91
SYNE2-209ENST00000553308 ATP9BO43861 1147 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 BNIP3LO60238 219 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 RNGTTO60942 597 aaKnown RBP9.34□□□□□ -0.91
SYNE2-209ENST00000553308 TRUB2O95900 331 aaKnown RBP9.34□□□□□ -0.91
SYNE2-209ENST00000553308 IGLV3-25P01717 112 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 HSP90AA1P07900 732 aaKnown RBP9.34□□□□□ -0.91
SYNE2-209ENST00000553308 KRT10P13645 584 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 PRCPP42785 496 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 LSSP48449 732 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 RPL34P49207 117 aaKnown RBP9.34□□□□□ -0.91
SYNE2-209ENST00000553308 FMO5P49326 533 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 PLK1P53350 603 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 UCNP55089 124 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 CLDN2P57739 230 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 NUCB2P80303 420 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 SULT2A1Q06520 285 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 SLC12A1Q13621 1099 aa9.34□□□□□ -0.91
SYNE2-209ENST00000553308 STILQ15468 1287 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms