RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CHD6Q8TD26 2715 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 SYNJ2BP-COX16A0A087WUM0 186 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 A0A1B0GTQ1 180 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 TTC34A8MYJ7 566 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 C1QTNF3-AMACRE9PGA6 284 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 P4HA2O15460 535 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 THAP12O43422 761 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 RFPL3O75679 317 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 DXOO77932 396 aaKnown RBP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 IGLV3-27P01718 113 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 TPM3P06753 285 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 C1SP09871 688 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 GOT1P17174 413 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 JUNDP17535 347 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 CCR5P51681 352 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 CDK17Q00537 523 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 MTA1Q13330 715 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 SLC12A1Q13621 1099 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 ELAVL3Q14576 367 aaKnown RBP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 STAT4Q14765 748 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 COBLL1Q53SF7 1204 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 DCAF6Q58WW2 860 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 FAM133BQ5BKY9 247 aaKnown RBP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 TTC39BQ5VTQ0 682 aaPredicted RBP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 RAP1GAP2Q684P5 730 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 SASS6Q6UVJ0 657 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 BHLHA9Q7RTU4 235 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 KIAA0907Q7Z7F0 614 aaPredicted RBP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 GATAD2AQ86YP4 633 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 EID2Q8N6I1 236 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 C1orf216Q8TAB5 229 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 BAHD1Q8TBE0 780 aaPredicted RBP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 WFDC5Q8TCV5 224 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 CLEC4CQ8WTT0 213 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 OR8D1Q8WZ84 308 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 TFAP2BQ92481 460 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 BAP1Q92560 729 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 BTN2A3PQ96KV6 586 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 FAM81BQ96LP2 452 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 CCDC114Q96M63 670 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 NUCKS1Q9H1E3 243 aaKnown RBP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 MTG2Q9H4K7 406 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 SYNCQ9H7C4 482 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 POPDC2Q9HBU9 364 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 DYRK4Q9NR20 520 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 COX16Q9P0S2 106 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 NAALADL1Q9UQQ1 740 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 PCDHGA1Q9Y5H4 931 aa8.98□□□□□ -0.97
TMEM116-217ENST00000552801 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.98□□□□□ -0.97
TMEM116-217ENST00000552801 PLXNB3Q9ULL4 1909 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 BNIP3LO60238 219 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 AFPP02771 609 aaKnown RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 PDGFRAP16234 1089 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 TACR2P21452 398 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 NUDT1P36639 197 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 YWHAZP63104 245 aaKnown RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 GCNT1Q02742 428 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 ZNF177Q13360 481 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 SMAD1Q15797 465 aaKnown RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 PKDCCQ504Y2 493 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 ZC3H12AQ5D1E8 599 aaKnown RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 PRAMEF14Q5SWL7 426 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 NADSYN1Q6IA69 706 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 DBX2Q6ZNG2 339 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 MMS22LQ6ZRQ5 1243 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 ENOSF1Q7L5Y1 443 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 TAC4Q86UU9 113 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 STK40Q8N2I9 435 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 NELFBQ8WX92 580 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 RPL10LQ96L21 214 aaKnown RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 FCRL2Q96LA5 508 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 PRICKLE1Q96MT3 831 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 RPRD1AQ96P16 312 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 SPAG5Q96R06 1193 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 PDCL3Q9H2J4 239 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 EVA1BQ9NVM1 165 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 DKK4Q9UBT3 224 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 CTNND2Q9UQB3 1225 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 PLXNA2O75051 1894 aa8.97□□□□□ -0.97
TMEM116-217ENST00000552801 MUC22E2RYF6 1773 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-217ENST00000552801 GOLGA4Q13439 2230 aaKnown RBP8.96□□□□□ -0.97
TMEM116-217ENST00000552801 TLR4O00206 839 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 PLK4O00444 970 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 DYNC1I1O14576 645 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 PMM2O15305 246 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 ADCY5O95622 1261 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 TRUB2O95900 331 aaKnown RBP8.96□□□□□ -0.98
TMEM116-217ENST00000552801 IGHV4-34P06331 123 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 MZF1P28698 734 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-217ENST00000552801 GNA15P30679 374 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 MAT2AP31153 395 aaKnown RBP8.96□□□□□ -0.98
TMEM116-217ENST00000552801 CCR1P32246 355 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 CTSOP43234 321 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-217ENST00000552801 NUMBP49757 651 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 PMS1P54277 932 aaKnown RBP8.96□□□□□ -0.98
TMEM116-217ENST00000552801 ADPRHP54922 357 aa8.96□□□□□ -0.98
TMEM116-217ENST00000552801 MCCD1P59942 119 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms