RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SNX16P57768 344 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 ST8SIA6P61647 398 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 FAM193AP78312 1265 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 GFPT1Q06210 699 aaPredicted RBP13.4□□□□□ -0.26
NPAS3-209ENST00000551008 C15orf59Q2T9L4 293 aaPredicted RBP13.4□□□□□ -0.26
NPAS3-209ENST00000551008 WDR45BQ5MNZ6 344 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 SYCP2LQ5T4T6 812 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 MANEALQ5VSG8 457 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 LAYNQ6UX15 382 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 FAM131BQ86XD5 332 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 MMAAQ8IVH4 418 aaKnown RBP13.4□□□□□ -0.26
NPAS3-209ENST00000551008 FAM131CQ96AQ9 280 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 GTPBP2Q9BX10 602 aaKnown RBP13.4□□□□□ -0.26
NPAS3-209ENST00000551008 WDCPQ9H6R7 721 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 IL21RQ9HBE5 538 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 MPP6Q9NZW5 540 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 STAP1Q9ULZ2 295 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 DAAM1Q9Y4D1 1078 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 ARID1BQ8NFD5 2236 aaPredicted RBP13.4□□□□□ -0.26
NPAS3-209ENST00000551008 PTPRBP23467 1997 aa13.4□□□□□ -0.27
NPAS3-209ENST00000551008 A0A0D9SEW6 157 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 A0A1B0GTW7 788 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 A0A1W2PP55 124 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 PLK4O00444 970 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 ATP9BO43861 1147 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 CLDN11O75508 207 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 MT-CO1P00395 513 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 DNTTP04053 509 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 STAT1P42224 750 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 CDH4P55283 916 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 GSCP56915 257 aaPredicted RBP13.39□□□□□ -0.27
NPAS3-209ENST00000551008 SHC2P98077 582 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 UBXN1Q04323 297 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 CLEC16AQ2KHT3 1053 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 CCDC14Q49A88 953 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 KCNT1Q5JUK3 1230 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 RNF219Q5W0B1 726 aaPredicted RBP13.39□□□□□ -0.27
NPAS3-209ENST00000551008 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
NPAS3-209ENST00000551008 USP30Q70CQ3 517 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 MON1BQ7L1V2 547 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 RABEPKQ7Z6M1 372 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 RXFP2Q8WXD0 754 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 BAP1Q92560 729 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 BTBD1Q9H0C5 482 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 MIR1-1HGQ9H1L0 117 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 NEUROG2Q9H2A3 272 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 FBXL12Q9NXK8 326 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 SUSD2Q9UGT4 822 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 ADAMTS1Q9UHI8 967 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 SARDHQ9UL12 918 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 PLXNB3Q9ULL4 1909 aa13.39□□□□□ -0.27
NPAS3-209ENST00000551008 E9PAM4 449 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 FAM72CH0Y354 149 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 K7ERQ8 282 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 BCAT2O15382 392 aaPredicted RBP13.38□□□□□ -0.27
NPAS3-209ENST00000551008 MOCS3O95396 460 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 F9P00740 461 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 SRCP12931 536 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 CEACAM1P13688 526 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 GLDCP23378 1020 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 SLC8A1P32418 973 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 RDXP35241 583 aaKnown RBP13.38□□□□□ -0.27
NPAS3-209ENST00000551008 PSMD8P48556 350 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 GALCP54803 685 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 HDAC4P56524 1084 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 ATP11AP98196 1134 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 MTA1Q13330 715 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 IQCB1Q15051 598 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 TTC31Q49AM3 519 aaPredicted RBP13.38□□□□□ -0.27
NPAS3-209ENST00000551008 FAM72AQ5TYM5 149 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 FAM72DQ6L9T8 149 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
NPAS3-209ENST00000551008 TRIM72Q6ZMU5 477 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 IRF2BP2Q7Z5L9 587 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 TFAP2DQ7Z6R9 452 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 FAM72BQ86X60 149 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 PHF13Q86YI8 300 aaPredicted RBP13.38□□□□□ -0.27
NPAS3-209ENST00000551008 SH2D3CQ8N5H7 860 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
NPAS3-209ENST00000551008 C1orf74Q96LT6 269 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 CAMK1GQ96NX5 476 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 SPAG5Q96R06 1193 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 HAPLN3Q96S86 360 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 SGK2Q9HBY8 427 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 TM9SF3Q9HD45 589 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
NPAS3-209ENST00000551008 NDFIP2Q9NV92 336 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 VPS51Q9UID3 782 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 HS3ST2Q9Y278 367 aa13.38□□□□□ -0.27
NPAS3-209ENST00000551008 FNDC3AQ9Y2H6 1198 aaKnown RBP13.38□□□□□ -0.27
NPAS3-209ENST00000551008 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.37□□□□□ -0.27
NPAS3-209ENST00000551008 SPAARA0A1B0GVQ0 90 aa13.37□□□□□ -0.27
NPAS3-209ENST00000551008 A0A1B0GVT2 93 aa13.37□□□□□ -0.27
NPAS3-209ENST00000551008 WNT9AO14904 365 aa13.37□□□□□ -0.27
NPAS3-209ENST00000551008 SMAD6O43541 496 aaKnown RBP13.37□□□□□ -0.27
NPAS3-209ENST00000551008 ZNF821O75541 412 aaPredicted RBP13.37□□□□□ -0.27
NPAS3-209ENST00000551008 ZMPSTE24O75844 475 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms