RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 RPRD1AQ96P16 312 aaPredicted RBP9.33□□□□□ -0.92
LETMD1-228ENST00000550929 SLC2A13Q96QE2 648 aa9.33□□□□□ -0.92
LETMD1-228ENST00000550929 PRMT1Q99873 361 aaKnown RBP9.33□□□□□ -0.92
LETMD1-228ENST00000550929 TRIM62Q9BVG3 475 aa9.33□□□□□ -0.92
LETMD1-228ENST00000550929 SIK2Q9H0K1 926 aa9.33□□□□□ -0.92
LETMD1-228ENST00000550929 SIX2Q9NPC8 291 aa9.33□□□□□ -0.92
LETMD1-228ENST00000550929 AASDHPPTQ9NRN7 309 aa9.33□□□□□ -0.92
LETMD1-228ENST00000550929 TMEM51Q9NW97 253 aa9.33□□□□□ -0.92
LETMD1-228ENST00000550929 APEX2Q9UBZ4 518 aa9.33□□□□□ -0.92
LETMD1-228ENST00000550929 VANGL2Q9ULK5 521 aa9.33□□□□□ -0.92
LETMD1-228ENST00000550929 MUC22E2RYF6 1773 aaPredicted RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 CKAP5Q14008 2032 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 A0A1W2PPC4 97 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 TARSL2A2RTX5 802 aaKnown RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 M0QYT0 321 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 CBX4O00257 560 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 PES1O00541 588 aaKnown RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 FLRT2O43155 660 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 ZNF883P0CG24 379 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 TFE3P19532 575 aaPredicted RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 CCR1P32246 355 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 KRT9P35527 623 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 NNMTP40261 264 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 CTSKP43235 329 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 C21orf59P57076 290 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 UBE2HP62256 183 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 PTK2Q05397 1052 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 EIF4EBP2Q13542 120 aaPredicted RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 AUHQ13825 339 aaKnown RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 KCNJ12Q14500 433 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 SUZ12Q15022 739 aaKnown RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 MEA1Q16626 185 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 PTPN20Q4JDL3 420 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 EFHC1Q5JVL4 640 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 CXorf57Q6NSI4 855 aaKnown RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 C19orf48Q6RUI8 117 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 C11orf57Q6ZUT1 292 aaPredicted RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 USP30Q70CQ3 517 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 SND1Q7KZF4 910 aaKnown RBP eCLIP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 GLRX5Q86SX6 157 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 SLC47A2Q86VL8 602 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 OR2T34Q8NGX1 318 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 MDM1Q8TC05 714 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 ACE2Q9BYF1 805 aaPredicted RBP9.32□□□□□ -0.92
LETMD1-228ENST00000550929 SYNCQ9H7C4 482 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 TMPRSS4Q9NRS4 437 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 TOR4AQ9NXH8 423 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 PCDHGC3Q9UN70 934 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 HS3ST4Q9Y661 456 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 ITIH6Q6UXX5 1313 aa9.32□□□□□ -0.92
LETMD1-228ENST00000550929 CFAP47Q6ZTR5 3102 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 NUMA1Q14980 2115 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 CACNA1EQ15878 2313 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3DA0A087WVF3 549 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3IA0A087WXS9 549 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3EA0A087X179 549 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3KA0A087X1G2 549 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.31□□□□□ -0.92
LETMD1-228ENST00000550929 A0A1B0GVM2 712 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 FAM149AA5PLN7 773 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 FAM221BA6H8Z2 402 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3FA6NER0 549 aaPredicted RBP9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TCAF2A6NFQ2 919 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 LRRC72A6NJI9 287 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3LB9A6J9 549 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 HSF2BPO75031 334 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 RTN2O75298 545 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 CNTN5O94779 1100 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3HP0C7X1 549 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 GOT1P17174 413 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 MAT2AP31153 395 aaKnown RBP9.31□□□□□ -0.92
LETMD1-228ENST00000550929 CCT8P50990 548 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 CLDN6P56747 220 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 PPP2CBP62714 309 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 RACK1P63244 317 aaKnown RBP9.31□□□□□ -0.92
LETMD1-228ENST00000550929 PPP2CAP67775 309 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 SLC6A3Q01959 620 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 ZNF177Q13360 481 aaPredicted RBP9.31□□□□□ -0.92
LETMD1-228ENST00000550929 RAPGEF1Q13905 1077 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 DLG2Q15700 870 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 C2CD6Q53TS8 623 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 RABGAP1LQ5R372 815 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3GQ6DHY5 549 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3CQ6IPX1 549 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 LRSAM1Q6UWE0 723 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 OLFML1Q6UWY5 402 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 CCNI2Q6ZMN8 369 aaPredicted RBP9.31□□□□□ -0.92
LETMD1-228ENST00000550929 DBX2Q6ZNG2 339 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 TBC1D3Q8IZP1 549 aaPredicted RBP9.31□□□□□ -0.92
LETMD1-228ENST00000550929 MLKLQ8NB16 471 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 KDM1BQ8NB78 822 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 BAHD1Q8TBE0 780 aaPredicted RBP9.31□□□□□ -0.92
LETMD1-228ENST00000550929 FRS2Q8WU20 508 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 FAM81BQ96LP2 452 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 CDC6Q99741 560 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 OSGEPQ9NPF4 335 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 ANLNQ9NQW6 1124 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 SARDHQ9UL12 918 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 SCML1Q9UN30 329 aa9.31□□□□□ -0.92
LETMD1-228ENST00000550929 PCDHGB2Q9Y5G2 931 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms