RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ZNF513Q8N8E2 541 aaPredicted RBP12.43□□□□□ -0.42
NR4A1-215ENST00000550557 VPS37AQ8NEZ2 397 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 YIPF3Q9GZM5 350 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 IL23AQ9NPF7 189 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 IARS2Q9NSE4 1012 aaKnown RBP12.43□□□□□ -0.42
NR4A1-215ENST00000550557 C6orf203Q9P0P8 240 aaPredicted RBP12.43□□□□□ -0.42
NR4A1-215ENST00000550557 PDHA1P08559 390 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 KELP23276 732 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 ARHGDIAP52565 204 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 PEX6Q13608 980 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 MROH9Q5TGP6 573 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 ARL14EPQ8N8R7 260 aaPredicted RBP12.43□□□□□ -0.42
NR4A1-215ENST00000550557 C2orf15Q8WU43 125 aaKnown RBP12.43□□□□□ -0.42
NR4A1-215ENST00000550557 CXorf40BQ96DE9 158 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 KRT4P19013 534 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 ARFIP2P53365 341 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 SLC5A3P53794 718 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 AGGF1Q8N302 714 aaeCLIP12.43□□□□□ -0.42
NR4A1-215ENST00000550557 LEMD2Q8NC56 503 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 FAR2Q96K12 515 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 MLPHQ9BV36 600 aaPredicted RBP12.43□□□□□ -0.42
NR4A1-215ENST00000550557 CPQQ9Y646 472 aa12.43□□□□□ -0.42
NR4A1-215ENST00000550557 LAMA4Q16363 1823 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 KANSL1LA0AUZ9 987 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 CACNB4O00305 520 aaPredicted RBP12.42□□□□□ -0.42
NR4A1-215ENST00000550557 E2F6O75461 281 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 TP53BP2Q13625 1128 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 EPS8L1Q8TE68 723 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 FAM84AQ96KN4 292 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 PRKD2Q9BZL6 878 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 PPCSQ9HAB8 311 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 ZMYM5Q9UJ78 669 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 GPSM3Q9Y4H4 160 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 SRRM3A6NNA2 597 aaPredicted RBP12.42□□□□□ -0.42
NR4A1-215ENST00000550557 RNF103O00237 685 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 TIMM44O43615 452 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 TPH1P17752 444 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 SLC39A5Q6ZMH5 540 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 MTSS1LQ765P7 747 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 EFL1Q7Z2Z2 1120 aaKnown RBP12.42□□□□□ -0.42
NR4A1-215ENST00000550557 C12orf56Q8IXR9 622 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 POF1BQ8WVV4 589 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 PANX3Q96QZ0 392 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 TMEM175Q9BSA9 504 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 ANKRD36CQ5JPF3 1778 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 CLDN11O75508 207 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 RNASEH2AO75792 299 aaKnown RBP12.42□□□□□ -0.42
NR4A1-215ENST00000550557 FGF18O76093 207 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 TM4SF4P48230 202 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 GAD2Q05329 585 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 BRMS1LQ5PSV4 323 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 LRRC6Q86X45 466 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 XPNPEP1Q9NQW7 623 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 RIC8BQ9NVN3 520 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 SOHLH2Q9NX45 425 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 WHRNQ9P202 907 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 APPL1Q9UKG1 709 aa12.42□□□□□ -0.42
NR4A1-215ENST00000550557 NCF1BA6NI72 391 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 NCF1CA8MVU1 366 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 NCF1P14598 390 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 FOSL2P15408 326 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 NQO1P15559 274 aaKnown RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 MATKP42679 507 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 ZNF143P52747 638 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 LRRC74AQ0VAA2 488 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 TRIM32Q13049 653 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 LRRC23Q53EV4 343 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 PRR23BQ6ZRT6 265 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 C1orf127Q8N9H9 656 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 SERAC1Q96JX3 654 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 FCRL2Q96LA5 508 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 CALCAP01258 141 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 CYP2A7P20853 494 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 POLE2P56282 527 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 ABCE1P61221 599 aaKnown RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 SKP1P63208 163 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 PFKPQ01813 784 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 HERVK_113Q902F9 699 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 ERP27Q96DN0 273 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 BTN2A3PQ96KV6 586 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 OSBPL1AQ9BXW6 950 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 FZD8Q9H461 694 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 MDM4O15151 490 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 SHOX2O60902 331 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 TNNI3P19429 210 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 GDI1P31150 447 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 SP2Q02086 613 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 TRMT61BQ9BVS5 477 aaKnown RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 ACP6Q9NPH0 428 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 NDE1Q9NXR1 346 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 GRID1Q9ULK0 1009 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 CCDC88AQ3V6T2 1871 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 HACD1B0YJ81 288 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 RFX3P48380 749 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 CHST9Q7L1S5 443 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 PRPF39Q86UA1 669 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms