RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TFE3P19532 575 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 CDH5P33151 784 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 NOS2P35228 1153 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 NNMTP40261 264 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 PPP2CBP62714 309 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 PPP2CAP67775 309 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 C5orf22Q49AR2 442 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 VWA3BQ502W6 1294 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 HSP90AA4PQ58FG1 418 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 SND1Q7KZF4 910 aaKnown RBP eCLIP17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 C14orf80Q86SX3 495 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 ZDHHC17Q8IUH5 632 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 RHBDD1Q8TEB9 315 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 NPY6RQ99463 290 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 TUBGCP2Q9BSJ2 902 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 FEM1AQ9BSK4 669 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 ANLNQ9NQW6 1124 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 CHMP5Q9NZZ3 219 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 FHOD1Q9Y613 1164 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 WNT9AO14904 365 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 ATP9BO43861 1147 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 ERCC5P28715 1186 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 GRK6P43250 576 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 C21orf59P57076 290 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 SNX16P57768 344 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 IL9RQ01113 521 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 DRAP1Q14919 205 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 SUZ12Q15022 739 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 CCNI2Q6ZMN8 369 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 OR14C36Q8NHC7 312 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 ARHGEF38Q9NXL2 777 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 SLC25A13Q9UJS0 675 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D30Q9Y2I9 924 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 ACACAQ13085 2346 aa17.89■□□□□ 0.45
CHMP1A-205ENST00000548650 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 A0A1B0GTQ1 180 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 A0A1W2PR77 199 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 PLK4O00444 970 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 LATO43561 262 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 CLDN11O75508 207 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 ADCY5O95622 1261 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 CYP11B1P15538 503 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 SCNN1AP37088 669 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 CXCR3P49682 368 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 SULT1E1P49888 294 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 KCNMA1Q12791 1236 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 ZNF177Q13360 481 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 RAPGEF1Q13905 1077 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 Q6ZVU0 165 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 PROSER1Q86XN7 944 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 ZNF683Q8IZ20 524 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 TMEM35BQ8NCS4 154 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 OR8D1Q8WZ84 308 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 NT5C3BQ969T7 300 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 NAA15Q9BXJ9 866 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 AASDHPPTQ9NRN7 309 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 RRN3Q9NYV6 651 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 VPS28Q9UK41 221 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 SARDHQ9UL12 918 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 TPX2Q9ULW0 747 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 STAP1Q9ULZ2 295 aa17.88■□□□□ 0.45
CHMP1A-205ENST00000548650 DSPP15924 2871 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 TAF4O00268 1085 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 ALOX15BO15296 676 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 SLC7A4O43246 635 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 DFNA5O60443 496 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 CNTN5O94779 1100 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 GABRB2P47870 512 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 CDH4P55283 916 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 BPIFB4P59827 614 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 SCAPQ12770 1279 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 SHBQ15464 509 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 ALFQ53S48 1182 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 BRMS1LQ5PSV4 323 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 KLHDC7AQ5VTJ3 777 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 AGBL4Q5VU57 503 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 DSG4Q86SJ6 1040 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 XYLT1Q86Y38 959 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 SH2D3CQ8N5H7 860 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 PGAP3Q96FM1 320 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 PSMB7Q99436 277 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 ELF4Q99607 663 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 TKTL2Q9H0I9 626 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 SIK2Q9H0K1 926 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 NUP62CLQ9H1M0 184 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 DACH1Q9UI36 760 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 HS3ST2Q9Y278 367 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 GOLGA4Q13439 2230 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 CACNA1GO43497 2377 aa17.87■□□□□ 0.45
CHMP1A-205ENST00000548650 FAM170AA1A519 330 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 F8VZ95 297 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 TNFSF14O43557 240 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 PLRG1O43660 514 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 RTN2O75298 545 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 CD38P28907 300 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 FLT3P36888 993 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 RNASE9P60153 205 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 DLG2Q15700 870 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 INAVAQ3KP66 663 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms