RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-204ENST00000547230 R3HDMLQ9H3Y0 253 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 DPEP3Q9H4B8 488 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 TMPRSS4Q9NRS4 437 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 PLK2Q9NYY3 685 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 GNEQ9Y223 722 aaKnown RBP12.94□□□□□ -0.34
CACNB3-204ENST00000547230 PLXNA1Q9UIW2 1896 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 STX16-NPEPL1H3BU86 382 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 LCP1P13796 627 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-204ENST00000547230 ARL4AP40617 200 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 PHKA2P46019 1235 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 IGBP1P78318 339 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 CELF3Q5SZQ8 465 aaKnown RBP12.94□□□□□ -0.34
CACNB3-204ENST00000547230 TMEM198Q66K66 360 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 ZFP1Q6P2D0 407 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 ZDHHC17Q8IUH5 632 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 COPS5Q92905 334 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 MARK4Q96L34 752 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 KLHL32Q96NJ5 620 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 ZNF385DQ9H6B1 395 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 DDX18Q9NVP1 670 aaKnown RBP12.94□□□□□ -0.34
CACNB3-204ENST00000547230 LMCD1Q9NZU5 365 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 VPS28Q9UK41 221 aa12.94□□□□□ -0.34
CACNB3-204ENST00000547230 MCM3APO60318 1980 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 A0A1B0GTW7 788 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 PRSS51A0A1B0GVH4 220 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 C22orf31O95567 290 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 C2P06681 752 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 ENO3P13929 434 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-204ENST00000547230 GLUD2P49448 558 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 CYLC2Q14093 348 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-204ENST00000547230 FAM187BQ17R55 369 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 TMEM259Q4ZIN3 620 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 FAM43BQ6ZT52 329 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-204ENST00000547230 TMEM126BQ8IUX1 230 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 GALNT4Q8N4A0 578 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNB3-204ENST00000547230 CCNYQ8ND76 341 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 CATSPER1Q8NEC5 780 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 ADCY4Q8NFM4 1077 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 RP9Q8TA86 221 aaKnown RBP12.93□□□□□ -0.34
CACNB3-204ENST00000547230 URGCPQ8TCY9 931 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 CATSPER2Q96P56 530 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 NUF2Q9BZD4 464 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 ILKAPQ9H0C8 392 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-204ENST00000547230 NMRAL1Q9HBL8 299 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 GALNT8Q9NY28 637 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 FZD10Q9ULW2 581 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 DMTF1Q9Y222 760 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 ZCWPW2A0A1B0GU75 182 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 TK2O00142 265 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 HDAC3O15379 428 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 GRID2O43424 1007 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 MPOP05164 745 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 JUNP05412 331 aaKnown RBP12.93□□□□□ -0.34
CACNB3-204ENST00000547230 HPCAP84074 193 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 MYBPC3Q14896 1274 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 USP41Q3LFD5 358 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 TREML2Q5T2D2 321 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 SEL1L3Q68CR1 1132 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 LBX2Q6XYB7 198 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 PGAM4Q8N0Y7 254 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 C7orf31Q8N865 590 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 SLC7A14Q8TBB6 771 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 NFKBIZQ9BYH8 718 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 PRDM12Q9H4Q4 367 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 WDR41Q9HAD4 459 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 OXSMQ9NWU1 459 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 RAP2CQ9Y3L5 183 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 AK5Q9Y6K8 562 aa12.93□□□□□ -0.34
CACNB3-204ENST00000547230 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 PIGNO95427 931 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 FAM58BPP0C7Q3 252 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 PCSK6P29122 969 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 ADORA2BP29275 332 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 PPARGP37231 505 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 PGGT1BP53609 377 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 IFRD2Q12894 506 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 PPP2R5DQ14738 602 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 HSP90AA5PQ58FG0 334 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 OLFML2BQ68BL8 750 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 CPSF7Q8N684 471 aaKnown RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 FAM124BQ9H5Z6 455 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 LRRC40Q9H9A6 602 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 IGSF9Q9P2J2 1179 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 KCNK1O00180 336 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 STRNO43815 780 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 SBK3P0C264 359 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 GRIA4P48058 902 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 RPL14P50914 215 aaKnown RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 PITX1P78337 314 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 NSUN2Q08J23 767 aaKnown RBP eCLIP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 AMIGO2Q86SJ2 522 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 RIOX2Q8IUF8 465 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 TMEM102Q8N9M5 508 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 RNF139Q8WU17 664 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms