RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RRN3Q9NYV6 651 aa14.49□□□□□ -0.09
SRP54-202ENST00000546080 BARX2Q9UMQ3 279 aaPredicted RBP14.49□□□□□ -0.09
SRP54-202ENST00000546080 SH3GLB1Q9Y371 365 aa14.49□□□□□ -0.09
SRP54-202ENST00000546080 HEMK1Q9Y5R4 338 aaPredicted RBP14.49□□□□□ -0.09
SRP54-202ENST00000546080 H3BNH8 94 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 PFKMP08237 780 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 CHRNA5P30532 468 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 ATICP31939 592 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 STAT5BP51692 787 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 NUP107P57740 925 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 MXD4Q14582 209 aaPredicted RBP14.48□□□□□ -0.09
SRP54-202ENST00000546080 STXBP2Q15833 593 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 FAM160B1Q5W0V3 765 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 EEF1DP3Q658K8 133 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 TMEM198Q66K66 360 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 JADE1Q6IE81 842 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 CARM1Q86X55 608 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 RNF168Q8IYW5 571 aaPredicted RBP14.48□□□□□ -0.09
SRP54-202ENST00000546080 LRRC71Q8N4P6 559 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 SMYD1Q8NB12 490 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 FAM156AQ8NDB6 213 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 ZSCAN18Q8TBC5 510 aaPredicted RBP14.48□□□□□ -0.09
SRP54-202ENST00000546080 RMND5BQ96G75 393 aaPredicted RBP14.48□□□□□ -0.09
SRP54-202ENST00000546080 MARK4Q96L34 752 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 KCTD15Q96SI1 283 aaPredicted RBP14.48□□□□□ -0.09
SRP54-202ENST00000546080 LGMNQ99538 433 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 NPAS2Q99743 824 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 TRPV6Q9H1D0 765 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 CAB39LQ9H9S4 337 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 PLGRKTQ9HBL7 147 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 PTPRHQ9HD43 1115 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 PNPLA3Q9NST1 481 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 C20orf96Q9NUD7 363 aaPredicted RBP14.48□□□□□ -0.09
SRP54-202ENST00000546080 FAIMQ9NVQ4 179 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 OXSMQ9NWU1 459 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 GGA3Q9NZ52 723 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 ADA2Q9NZK5 511 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 MFHAS1Q9Y4C4 1052 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 AP4S1Q9Y587 144 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 SSC5DA1L4H1 1573 aa14.48□□□□□ -0.09
SRP54-202ENST00000546080 RNF103O00237 685 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 B4GALT5O43286 388 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 PIGNO95427 931 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 NELFEP18615 380 aaKnown RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 TFE3P19532 575 aaPredicted RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 PSMB4P28070 264 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ATXN1P54253 815 aaKnown RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 CBX3Q13185 183 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 DHRS4L2Q6PKH6 230 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 KRT27Q7Z3Y8 459 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 CLEC14AQ86T13 490 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 PATL1Q86TB9 770 aaKnown RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 CNTD1Q8N815 330 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 REPS2Q8NFH8 660 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 URGCPQ8TCY9 931 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ZNF669Q96BR6 464 aaPredicted RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 ASB9Q96DX5 294 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 MOCOSQ96EN8 888 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ZNF668Q96K58 619 aaPredicted RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 CEP41Q9BYV8 373 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 MAGEB5Q9BZ81 275 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 DRC3Q9H069 523 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ACAD9Q9H845 621 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 PRDM16Q9HAZ2 1276 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ACSS2Q9NR19 701 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 SEPT10Q9P0V9 454 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 BLOC1S6Q9UL45 172 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 TDRKHQ9Y2W6 561 aaKnown RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 LACTBL1A8MY62 500 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 INO80B-WBP1J3KQ70 363 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 GRID2O43424 1007 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 F7P08709 466 aaPredicted RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 FGFR3P22607 806 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ICAM3P32942 547 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 GRIA4P48058 902 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 PRKAA1Q13131 559 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 PDAP1Q13442 181 aaKnown RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 IKBKEQ14164 716 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 DLG2Q15700 870 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 LIPMQ5VYY2 423 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 PMF1Q6P1K2 205 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 SCUBE3Q8IX30 993 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 C12orf29Q8N999 325 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ZBTB8BQ8NAP8 495 aaPredicted RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 LRTOMTQ8WZ04 291 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 HPDLQ96IR7 371 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 FCRL3Q96P31 734 aaPredicted RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 WRNIP1Q96S55 665 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 OSBPL6Q9BZF3 934 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 CDT1Q9H211 546 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ARHGEF38Q9NXL2 777 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 VTI1BQ9UEU0 232 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 ZNF214Q9UL59 606 aaPredicted RBP14.47□□□□□ -0.09
SRP54-202ENST00000546080 ANK1P16157 1881 aa14.47□□□□□ -0.09
SRP54-202ENST00000546080 SH3PXD2BA1X283 911 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 SLCO1B7G3V0H7 640 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 ACKR2O00590 384 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 CSPG5O95196 566 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 C2P06681 752 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 APOA4P06727 396 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms