RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 DUSP16Q9BY84 665 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 LRRC4Q9HBW1 653 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 IARS2Q9NSE4 1012 aaKnown RBP16.14■□□□□ 0.17
LDLR-204ENST00000545707 DNAJB4Q9UDY4 337 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 AIM2O14862 343 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 HUS1O60921 280 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 EPHA3P29320 983 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 SCNN1AP37088 669 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 SERPINB8P50452 374 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 LIMK2P53671 638 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 ZBTB17Q13105 803 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 PAFAH1B3Q15102 231 aaKnown RBP16.14■□□□□ 0.17
LDLR-204ENST00000545707 TRIP10Q15642 601 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 KIAA0319Q5VV43 1072 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 AAGABQ6PD74 315 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 TDRD5Q8NAT2 981 aaKnown RBP16.14■□□□□ 0.17
LDLR-204ENST00000545707 ARRDC4Q8NCT1 418 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 URGCPQ8TCY9 931 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 FERMT1Q9BQL6 677 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 MED10Q9BTT4 135 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 MLPHQ9BV36 600 aaPredicted RBP16.14■□□□□ 0.17
LDLR-204ENST00000545707 KATNBL1Q9H079 304 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 C20orf96Q9NUD7 363 aaPredicted RBP16.14■□□□□ 0.17
LDLR-204ENST00000545707 BFARQ9NZS9 450 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 RCOR3Q9P2K3 495 aaPredicted RBP16.14■□□□□ 0.17
LDLR-204ENST00000545707 SLC39A10Q9ULF5 831 aa16.14■□□□□ 0.17
LDLR-204ENST00000545707 PLXNA1Q9UIW2 1896 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 YJEFN3A6XGL0 299 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 TK2O00142 265 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 PHGDHO43175 533 aaKnown RBP16.13■□□□□ 0.17
LDLR-204ENST00000545707 DAB1O75553 588 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 AP2A1O95782 977 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 MMP3P08254 477 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 ADRA1BP35368 520 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 AVPR1AP37288 418 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 TKTL1P51854 596 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 DLG1Q12959 904 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 NAB1Q13506 487 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 CCDC153Q494R4 210 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 SIX6OS1Q8N1H7 587 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 WNT8BQ93098 351 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 PPP2R3CQ969Q6 453 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 NT5C3BQ969T7 300 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 KCNK16Q96T55 309 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 NMRAL1Q9HBL8 299 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 NMBRP28336 390 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 TAF6P49848 677 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 ATXN3P54252 364 aaPredicted RBP16.13■□□□□ 0.17
LDLR-204ENST00000545707 LILRA4P59901 499 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 PPIL2Q13356 520 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 EML3Q32P44 896 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 WSCD1Q658N2 575 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 CLEC20AQ6ZU45 233 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 TMEM135Q86UB9 458 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 FBXW8Q8N3Y1 598 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 SPATA6LQ8N4H0 392 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 OR6J1Q8NGC5 347 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 DNAJB3Q8WWF6 145 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 CDCA5Q96FF9 252 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 ULBP1Q9BZM6 244 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 VTA1Q9NP79 307 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 SSX2IPQ9Y2D8 614 aa16.13■□□□□ 0.17
LDLR-204ENST00000545707 TIMM13Q9Y5L4 95 aaPredicted RBP16.13■□□□□ 0.17
LDLR-204ENST00000545707 TXNDC9O14530 226 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 NPR3P17342 541 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 NFKB1P19838 968 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 MAGEA12P43365 314 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 BTKQ06187 659 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 TMEM198Q66K66 360 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 GPRIN1Q7Z2K8 1008 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 KCNMB4Q86W47 210 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 RNF148Q8N7C7 305 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 CELF6Q96J87 481 aaKnown RBP16.12■□□□□ 0.17
LDLR-204ENST00000545707 TNIP3Q96KP6 325 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 MARK4Q96L34 752 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 KLHL4Q9C0H6 718 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 ADARB2Q9NS39 739 aaKnown RBP16.12■□□□□ 0.17
LDLR-204ENST00000545707 GDAP2Q9NXN4 497 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 PDP2Q9P2J9 529 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 ARHGAP26Q9UNA1 814 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 CDY2AQ9Y6F7 541 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 CDY1Q9Y6F8 540 aa16.12■□□□□ 0.17
LDLR-204ENST00000545707 SF3B1O75533 1304 aaKnown RBP eCLIP16.12■□□□□ 0.179e-6■■■■■ 68.9
LDLR-204ENST00000545707 TRIM13O60858 407 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 DARSP14868 501 aaKnown RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 PTPN1P18031 435 aaKnown RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 TPI1P60174 286 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 MPP3Q13368 585 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 GRM3Q14832 879 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 FASTKD5Q7L8L6 764 aaKnown RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 USP33Q8TEY7 942 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 EDEM1Q92611 657 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 ZFP42Q96MM3 310 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 HNRNPABQ99729 332 aaKnown RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 TASP1Q9H6P5 420 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 TCF7L2Q9NQB0 619 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 TMEM30AQ9NV96 361 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 STAP1Q9ULZ2 295 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 H3BNX3 289 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms