RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PES1O00541 588 aaKnown RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 RNASEH1O60930 286 aaKnown RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 RFPL3O75679 317 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 ACSL1P33121 698 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 CSKP41240 450 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 GRIA4P48058 902 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 OXCT1P55809 520 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 SFSWAPQ12872 951 aaKnown RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 SLC12A1Q13621 1099 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 HES3Q5TGS1 186 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 TTC39BQ5VTQ0 682 aaPredicted RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 RAP1GAP2Q684P5 730 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 ZNF776Q68DI1 518 aaPredicted RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 OR6B2Q6IFH4 312 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 ZDHHC17Q8IUH5 632 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 PASD1Q8IV76 773 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 SPACA3Q8IXA5 215 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 CNDP2Q96KP4 475 aaKnown RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 SYNCQ9H7C4 482 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 DDIT4Q9NX09 232 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 XPO7Q9UIA9 1087 aaKnown RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 INTS6Q9UL03 887 aaKnown RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.72■□□□□ 0.27
DDX55-212ENST00000544738 NUMA1Q14980 2115 aa16.72■□□□□ 0.27
DDX55-212ENST00000544738 BRINP1O60477 761 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 FSBPO95073 299 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 SRPRAP08240 638 aaKnown RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 EEF1GP26641 437 aaKnown RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 CTSKP43235 329 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 RPS14P62263 151 aaKnown RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 PITX1P78337 314 aaPredicted RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 SLC6A3Q01959 620 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 RAPGEF1Q13905 1077 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 KCNJ12Q14500 433 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 HNRNPA1L2Q32P51 320 aaKnown RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 FSCBQ5H9T9 825 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 PITRM1Q5JRX3 1037 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 RABGAP1LQ5R372 815 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 SLC26A9Q7LBE3 791 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 SLC47A2Q86VL8 602 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 TMEM35BQ8NCS4 154 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 C1orf131Q8NDD1 294 aaKnown RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 ZNF397Q8NF99 534 aaPredicted RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 MYO19Q96H55 970 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 NAF1Q96HR8 494 aaKnown RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 PPP1R9BQ96SB3 815 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 SEMA4CQ9C0C4 833 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 BTBD1Q9H0C5 482 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 RSPH9Q9H1X1 276 aaPredicted RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 PDCL3Q9H2J4 239 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 TMEM51Q9NW97 253 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 RRN3Q9NYV6 651 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 AJAP1Q9UKB5 411 aaPredicted RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 ERVW-1Q9UQF0 538 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 NCKAP1Q9Y2A7 1128 aa16.71■□□□□ 0.27
DDX55-212ENST00000544738 MUC22E2RYF6 1773 aaPredicted RBP16.71■□□□□ 0.27
DDX55-212ENST00000544738 SYNJ2BP-COX16A0A087WUM0 186 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 TARSL2A2RTX5 802 aaKnown RBP16.7■□□□□ 0.26
DDX55-212ENST00000544738 B8ZZF3 427 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 C1SP09871 688 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 CDK4P11802 303 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 NOS2P35228 1153 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 ACTN2P35609 894 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 NNMTP40261 264 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 C21orf59P57076 290 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 ECT2LQ008S8 904 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 LY6DQ14210 128 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 DRAP1Q14919 205 aaPredicted RBP16.7■□□□□ 0.26
DDX55-212ENST00000544738 HSP90AA4PQ58FG1 418 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 KLHDC7AQ5VTJ3 777 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 RNF219Q5W0B1 726 aaPredicted RBP16.7■□□□□ 0.26
DDX55-212ENST00000544738 OLFML1Q6UWY5 402 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 FAM183BPQ6ZVS7 135 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 USP30Q70CQ3 517 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 BIRC7Q96CA5 298 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 MRGPRX3Q96LB0 322 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 LGMNQ99538 433 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 PRMT1Q99873 361 aaKnown RBP16.7■□□□□ 0.26
DDX55-212ENST00000544738 SGK2Q9HBY8 427 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 OSGEPQ9NPF4 335 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 SAMSN1Q9NSI8 373 aaKnown RBP16.7■□□□□ 0.26
DDX55-212ENST00000544738 COX16Q9P0S2 106 aa16.7■□□□□ 0.26
DDX55-212ENST00000544738 EDDM13A0A1B0GTR0 161 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 A0A1B0GVM2 712 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 TCAF2A6NFQ2 919 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 DFNA5O60443 496 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 DAB1O75553 588 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 GRAP2O75791 330 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 SEMA4FO95754 770 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 ERBB2P04626 1255 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 ITGAVP06756 1048 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 CD27P26842 260 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 RHDQ02161 417 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 SULT2A1Q06520 285 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 PTPN20Q4JDL3 420 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 TCP11X2Q5H9J9 407 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 ARHGAP40Q5TG30 622 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 DPY19L2P1Q6NXN4 242 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms