RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ADAMTS6Q9UKP5 1117 aa6.61□□□□□ -1.35
CPSF7-222ENST00000544585 ADAM28Q9UKQ2 775 aa6.61□□□□□ -1.35
CPSF7-222ENST00000544585 SIK3Q9Y2K2 1263 aa6.61□□□□□ -1.35
CPSF7-222ENST00000544585 LAMA4Q16363 1823 aa6.61□□□□□ -1.35
CPSF7-222ENST00000544585 FLNBO75369 2602 aaKnown RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 A0A0G2JNJ9 132 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 FFAR2O15552 330 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 DAPK3O43293 454 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 CHMP2AO43633 222 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 ERLIN2O94905 339 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 CSTBP04080 98 aaKnown RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 ITGB2P05107 769 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 FTH1P19P0C7X4 201 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 NCAM1P13591 858 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 PTPN2P17706 415 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 AFMP43652 599 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 CXCL12P48061 93 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 CCR3P51677 355 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 MLLT6P55198 1093 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 SHC2P98077 582 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 AKAP17AQ02040 695 aaKnown RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 TLE1Q04724 770 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 ELAVL2Q12926 359 aaKnown RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 MTAPQ13126 283 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 MXD4Q14582 209 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 UGCGQ16739 394 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 C19orf54Q5BKX5 351 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 NOTUMQ6P988 496 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 TSSK4Q6SA08 328 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 TPRG1Q6ZUI0 275 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 DTX1Q86Y01 620 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 TP53INP2Q8IXH6 220 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 UNC5BQ8IZJ1 945 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 AGBL5Q8NDL9 886 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 ZNF480Q8WV37 535 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 DNASE1L2Q92874 299 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 CLIC6Q96NY7 704 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 CLSTN3Q9BQT9 956 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 TTPALQ9BTX7 342 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 TTLL2Q9BWV7 592 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 TRIM6Q9C030 488 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 LSG1Q9H089 658 aaKnown RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 UNC45AQ9H3U1 944 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 LMAN1LQ9HAT1 526 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 BCO1Q9HAY6 547 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 MBNL3Q9NUK0 354 aaKnown RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 Q9UFV3 132 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 FBXW11Q9UKB1 542 aa6.6□□□□□ -1.35
CPSF7-222ENST00000544585 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.6□□□□□ -1.35
CPSF7-222ENST00000544585 DOCK8Q8NF50 2099 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 CYP3A7-CYP3A51PA0A087WV96 503 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 F8W8V4 182 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 SKAP2O75563 359 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 THP07101 528 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 C8AP07357 584 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 C8BP07358 591 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 RNASE1P07998 156 aaKnown RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 HARSP12081 509 aaKnown RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 HNRNPLP14866 589 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 CYP3A7P24462 503 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 MLH1P40692 756 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 QARSP47897 775 aaKnown RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 HSPA7P48741 367 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 SCNN1GP51170 649 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 LIMK1P53667 647 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 PTENP60484 403 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 LAMTOR4Q0VGL1 99 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 KCNMA1Q12791 1236 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 TFDP1Q14186 410 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 SIM2Q14190 667 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 FLYWCH1Q4VC44 716 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 PABPC1LQ4VXU2 614 aaKnown RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 PRSS36Q5K4E3 855 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 N4BP2L1Q5TBK1 243 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 KLHDC7AQ5VTJ3 777 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 MOXD1Q6UVY6 613 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 PRR23BQ6ZRT6 265 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 ANO5Q75V66 913 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 CEP57Q86XR8 500 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 TXLNBQ8N3L3 684 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 RNF152Q8N8N0 203 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 RNF149Q8NC42 400 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 CCDC148Q8NFR7 591 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 LNX1Q8TBB1 728 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 IFI44Q8TCB0 444 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 FAM3CQ92520 227 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 ZNF566Q969W8 418 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 ELSPBP1Q96BH3 223 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 MCRS1Q96EZ8 462 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 CEP170P1Q96L14 293 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 TBATAQ96M53 351 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 KXD1Q9BQD3 176 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 SH2D3AQ9BRG2 576 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 TRMT61BQ9BVS5 477 aaKnown RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 DHX33Q9H6R0 707 aaKnown RBP6.59□□□□□ -1.35
CPSF7-222ENST00000544585 BRD9Q9H8M2 597 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 MINDY3Q9H8M7 445 aa6.59□□□□□ -1.35
CPSF7-222ENST00000544585 PCDH18Q9HCL0 1135 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms