RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 SEPT5Q99719 369 aaPredicted RBP17.43■□□□□ 0.38
PTPRO-209ENST00000543886 SLC39A8Q9C0K1 460 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 SLC17A6Q9P2U8 582 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 HCSTQ9UBK5 93 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 USH1CQ9Y6N9 552 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 TTC3P53804 2025 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 TBKBP1A7MCY6 615 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 H7C4K7 107 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 SOAT2O75908 522 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 DNAJC8O75937 253 aaPredicted RBP17.43■□□□□ 0.38
PTPRO-209ENST00000543886 TROVE2P10155 538 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTPRO-209ENST00000543886 ERVK-10P10266 1014 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 ALDH3A1P30838 453 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 NPY2RP49146 381 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 EFEMP1Q12805 493 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 TIGD7Q6NT04 549 aaPredicted RBP17.43■□□□□ 0.38
PTPRO-209ENST00000543886 LINC00523Q86TU6 105 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTPRO-209ENST00000543886 ZSCAN18Q8TBC5 510 aaPredicted RBP17.43■□□□□ 0.38
PTPRO-209ENST00000543886 SPPL2BQ8TCT7 592 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 APOL2Q9BQE5 337 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 TMEM175Q9BSA9 504 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 IL37Q9NZH6 218 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 UBP1Q9NZI7 540 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 SLC27A5Q9Y2P5 690 aa17.43■□□□□ 0.38
PTPRO-209ENST00000543886 AAR2Q9Y312 384 aaKnown RBP17.43■□□□□ 0.38
PTPRO-209ENST00000543886 MTMR11A4FU01 709 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 USP1O94782 785 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 MYCP01106 439 aaPredicted RBP17.42■□□□□ 0.38
PTPRO-209ENST00000543886 MLLT6P55198 1093 aaPredicted RBP17.42■□□□□ 0.38
PTPRO-209ENST00000543886 SETDB1Q15047 1291 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 PIK3R6Q5UE93 754 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 OTOP3Q7RTS5 596 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 C14orf80Q86SX3 495 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.42■□□□□ 0.38
PTPRO-209ENST00000543886 CNTD1Q8N815 330 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 TSSK1BQ9BXA7 367 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 IL22Q9GZX6 179 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 TLR8Q9NR97 1041 aaKnown RBP17.42■□□□□ 0.38
PTPRO-209ENST00000543886 OLA1Q9NTK5 396 aaKnown RBP17.42■□□□□ 0.38
PTPRO-209ENST00000543886 MPP6Q9NZW5 540 aa17.42■□□□□ 0.38
PTPRO-209ENST00000543886 MAGEB16A2A368 324 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 MATN3O15232 486 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 ATP9BO43861 1147 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 MAFKO60675 156 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 NEBLO76041 1014 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 BGNP21810 368 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 CRHR1P34998 444 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 PSEN1P49768 467 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 CCDC15Q0P6D6 951 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 SMARCB1Q12824 385 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 CDH17Q12864 832 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 GPR17Q13304 367 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 SMAD1Q15797 465 aaKnown RBP17.41■□□□□ 0.38
PTPRO-209ENST00000543886 TRIM42Q8IWZ5 723 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 FITM2Q8N6M3 262 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 ACMSDQ8TDX5 336 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 PTPRN2Q92932 1015 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 FCRL3Q96P31 734 aaPredicted RBP17.41■□□□□ 0.38
PTPRO-209ENST00000543886 PPP1R2P1Q96PQ5 205 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 NPHS2Q9NP85 383 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 CLIC5Q9NZA1 410 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 FNIP2Q9P278 1114 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 FAM237BA0A1B0GVD1 139 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 FAM92AA1XBS5 289 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 NT5C1B-RDH14C9J2C7 533 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 HGSO14964 777 aaPredicted RBP17.41■□□□□ 0.38
PTPRO-209ENST00000543886 ANXA9O76027 345 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 GALTP07902 379 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 GP5P40197 560 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 PBX3P40426 434 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 FRG1Q14331 258 aaKnown RBP17.41■□□□□ 0.38
PTPRO-209ENST00000543886 TCTN1Q2MV58 587 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 GALNTL6Q49A17 601 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 RTP2Q5QGT7 225 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 CERCAMQ5T4B2 595 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 SWT1Q5T5J6 900 aaKnown RBP17.41■□□□□ 0.38
PTPRO-209ENST00000543886 AFMIDQ63HM1 303 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 RNF19BQ6ZMZ0 732 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 ANKS3Q6ZW76 656 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 TMEM135Q86UB9 458 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 LRRC49Q8IUZ0 686 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 ATP6V0D2Q8N8Y2 350 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 ARMC2Q8NEN0 867 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 IL12RB2Q99665 862 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 CPNE1Q99829 537 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 NDFIP2Q9NV92 336 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 IL1RAPL1Q9NZN1 696 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 MAGED2Q9UNF1 606 aaPredicted RBP17.41■□□□□ 0.38
PTPRO-209ENST00000543886 PSAT1Q9Y617 370 aa17.41■□□□□ 0.38
PTPRO-209ENST00000543886 MRPL42Q9Y6G3 142 aaKnown RBP17.41■□□□□ 0.38
PTPRO-209ENST00000543886 WASH4PA8MWX3 477 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 CACNG3O60359 315 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 DCTN3O75935 186 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 ITGA2BP08514 1039 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 DNAJB2P25686 324 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 PDE1BQ01064 536 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 TAF10Q12962 218 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 TRIP4Q15650 581 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms