RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PAMP19021 973 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CDH5P33151 784 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 PTDSS1P48651 473 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 SLC7A2P52569 658 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 NAB1Q13506 487 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 TMEM132BQ14DG7 1078 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 LRRC24Q50LG9 513 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 IFIT1BQ5T764 474 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 KLHDC7AQ5VTJ3 777 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 KRT39Q6A163 491 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 GALNT18Q6P9A2 607 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF551Q7Z340 670 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 MLKLQ8NB16 471 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 NKX2-3Q8TAU0 364 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 BAP1Q92560 729 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 ORAI2Q96SN7 254 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CTRCQ99895 268 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 TP63Q9H3D4 680 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 NARFLQ9H6Q4 476 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 SAMSN1Q9NSI8 373 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 GPR52Q9Y2T5 361 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 WBP11Q9Y2W2 641 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 GPR89AB7ZAQ6 455 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 TNFRSF21O75509 655 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CNOT4O95628 575 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 GPR89BP0CG08 455 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 TPBGLP0DKB5 382 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 NPR3P17342 541 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CCR9P51686 369 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 ATP12AP54707 1039 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 STX1BP61266 288 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 YWHAEP62258 255 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 GFPT1Q06210 699 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 SQSTM1Q13501 440 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 HNRNPDQ14103 355 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 KCNA10Q16322 511 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 KIZQ2M2Z5 673 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 C12orf60Q5U649 245 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 BTBD8Q5XKL5 378 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 JMJD6Q6NYC1 403 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 ARSKQ6UWY0 536 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CATSPERGQ6ZRH7 1159 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 THAP5Q7Z6K1 395 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 GDF3Q9NR23 364 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 MYH1P12882 1939 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 COL18A1P39060 1754 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 PRR5-ARHGAP8B1AHC4 643 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 H0YGN5 161 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 NOL3O60936 208 aaKnown RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 JRKO75564 520 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 KLHL18O94889 574 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 CAPNS1P04632 268 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 MLNP12872 115 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 DRD4P21917 467 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 BMI1P35226 326 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 SYKP43405 635 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 NPY2RP49146 381 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 SPARCL1Q14515 664 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 CBX2Q14781 532 aaPredicted RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 DLGAP5Q15398 846 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 RGS21Q2M5E4 152 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 PITRM1Q5JRX3 1037 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 STYK1Q6J9G0 422 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 GAB3Q8WWW8 586 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 AZIN2Q96A70 460 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 PRRX2Q99811 253 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 TIPINQ9BVW5 301 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 TRIM54Q9BYV2 358 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 TMBIM4Q9HC24 238 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 AURKCQ9UQB9 309 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 NFS1Q9Y697 457 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 LRP6O75581 1613 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 TRBV23-1A0A0A0MS06 115 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 KBTBD13C9JR72 458 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 CCNT2O60583 730 aaKnown RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 AFPP02771 609 aaKnown RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 IL6P05231 212 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 C6P13671 934 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 PTPN2P17706 415 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 PDIA2Q13087 525 aaKnown RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 CYP2A13Q16696 494 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 SLC9C2Q5TAH2 1124 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 SSX9Q7RTT3 188 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 ADCK1Q86TW2 530 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 LRRTM4Q86VH4 590 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 CDKL3Q8IVW4 592 aaPredicted RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 SRFBP1Q8NEF9 429 aaKnown RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF274Q96GC6 653 aaPredicted RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 APOL2Q9BQE5 337 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 SLC6A17Q9H1V8 727 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 TIGARQ9NQ88 270 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 UFSP2Q9NUQ7 469 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.05□□□□□ -0.96
VPS13D-212ENST00000543766 DAPK2Q9UIK4 370 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 HCN2Q9UL51 889 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 A0A1W2PPL8 197 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 A0A1W2PRG6 482 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 C12orf71A8MTZ7 269 aa9.05□□□□□ -0.96
VPS13D-212ENST00000543766 H7C0S8 307 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms