RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	SMAD1	Q15797	465 aa	Known RBP	13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	CFAP157	Q5JU67	520 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	TWF2	Q6IBS0	349 aa	Known RBP	13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	TMEM154	Q6P9G4	183 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	MAVS	Q7Z434	540 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	CMC1	Q7Z7K0	106 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	TP53INP2	Q8IXH6	220 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	TMEM86A	Q8N2M4	240 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	OR6Y1	Q8NGX8	325 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	BRI3BP	Q8WY22	251 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	HDAC11	Q96DB2	347 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	PGAP3	Q96FM1	320 aa	Predicted RBP	13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	SENP8	Q96LD8	212 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	PPP1R10	Q96QC0	940 aa	Known RBP	13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	ZNF184	Q99676	751 aa	Predicted RBP	13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	GORASP1	Q9BQQ3	440 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	SYT15	Q9BQS2	421 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	CRTAC1	Q9NQ79	661 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	SLC38A7	Q9NVC3	462 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	NDE1	Q9NXR1	346 aa		13.77	□□□□□ -0.21
PPME1-208	ENST00000543525	GNE	Q9Y223	722 aa	Known RBP	13.77	□□□□□ -0.21
PPME1-208	ENST00000543525		A0A088AWK7	358 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525		A0A096LPK6	155 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	ZCWPW2	A0A1B0GU75	182 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	EIF4E1B	A6NMX2	242 aa	Known RBP	13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	YJEFN3	A6XGL0	299 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	HAS3	O00219	553 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	PTGES	O14684	152 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	USP12	O75317	370 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	SKAP2	O75563	359 aa	Predicted RBP	13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	LTF	P02788	710 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	APOA4	P06727	396 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	NCAM1	P13591	858 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	OLIG2	Q13516	323 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	IRF5	Q13568	498 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	KCTD11	Q693B1	232 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	FSTL4	Q6MZW2	842 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	RSPH3	Q86UC2	560 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	TLK2	Q86UE8	772 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	FAM35A	Q86V20	835 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	RNF169	Q8NCN4	708 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	URGCP	Q8TCY9	931 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	PARK7	Q99497	189 aa	Known RBP	13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	EPAS1	Q99814	870 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	CDH19	Q9H159	772 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	DDIT4	Q9NX09	232 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	NSMCE4A	Q9NXX6	385 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	PTCH2	Q9Y6C5	1203 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	ZNF236	Q9UL36	1845 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	C17orf102	A2RUQ5	167 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	DPPA5	A6NC42	116 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	ZNF195	O14628	629 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	CCNT2	O60583	730 aa	Known RBP	13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	MYL3	P08590	195 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	LINGO3	P0C6S8	592 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	NCF2	P19878	526 aa	Predicted RBP	13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	DNAJB2	P25686	324 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	COG7	P83436	770 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	SLC25A3	Q00325	362 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	GALNT2	Q10471	571 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	MPP3	Q13368	585 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	FAM110C	Q1W6H9	321 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	PRAMEF19	Q5SWL8	479 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	KIAA0319	Q5VV43	1072 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	KCNMB4	Q86W47	210 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	ADAM32	Q8TC27	787 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	TSNARE1	Q96NA8	513 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	SMO	Q99835	787 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	MLPH	Q9BV36	600 aa	Predicted RBP	13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	IL22	Q9GZX6	179 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	ZNF358	Q9NW07	568 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	SCOC	Q9UIL1	159 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	ANKRD6	Q9Y2G4	727 aa		13.76	□□□□□ -0.21
PPME1-208	ENST00000543525	E2F8	A0AVK6	867 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	ATP9B	O43861	1147 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	TRIM13	O60858	407 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	BAG2	O95816	211 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	USP17L7	P0C7H9	530 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	GNAT1	P11488	350 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	NFKB1	P19838	968 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	CD68	P34810	354 aa	Predicted RBP	13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	CPT1A	P50416	773 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	GSTA3	Q16772	222 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	HSP90AA5P	Q58FG0	334 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	RAB41	Q5JT25	222 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	EPGN	Q6UW88	154 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	ADGRG6	Q86SQ4	1221 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	CLEC14A	Q86T13	490 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	PLD6	Q8N2A8	252 aa	Known RBP	13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	POU5F2	Q8N7G0	328 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	ATXN7L3B	Q96GX2	97 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	AGAP2	Q99490	1192 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	ANLN	Q9NQW6	1124 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	TLL2	Q9Y6L7	1015 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	TSC2	P49815	1807 aa		13.75	□□□□□ -0.21
PPME1-208	ENST00000543525	MAGEA13P	A6NCF6	341 aa		13.74	□□□□□ -0.21
PPME1-208	ENST00000543525		G3V2L1	256 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms