RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 RHBDF2Q6PJF5 856 aa28.5■■■□□ 2.15
CCM2-218ENST00000541586 LRRC45Q96CN5 670 aa28.5■■■□□ 2.15
CCM2-218ENST00000541586 LGMNQ99538 433 aa28.5■■■□□ 2.15
CCM2-218ENST00000541586 LINC00597Q9H2U6 94 aa28.5■■■□□ 2.15
CCM2-218ENST00000541586 THG1LQ9NWX6 298 aaKnown RBP28.5■■■□□ 2.15
CCM2-218ENST00000541586 MTRF1LQ9UGC7 380 aaKnown RBP28.5■■■□□ 2.15
CCM2-218ENST00000541586 RAD54BQ9Y620 910 aa28.5■■■□□ 2.15
CCM2-218ENST00000541586 FGF10O15520 208 aaPredicted RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 CAV1Q03135 178 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 HTR3DQ70Z44 454 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 BBS7Q8IWZ6 715 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 MREGQ8N565 214 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 TSEN2Q8NCE0 465 aaKnown RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 CATSPERBQ9H7T0 1116 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 WNT6Q9Y6F9 365 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 NUP210Q8TEM1 1887 aaPredicted RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 E2F8A0AVK6 867 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 SERPINB6P35237 376 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 AUHQ13825 339 aaKnown RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 HIBCHQ6NVY1 386 aaPredicted RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 MTERF4Q7Z6M4 381 aaKnown RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 ZNF683Q8IZ20 524 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 TRMT61BQ9BVS5 477 aaKnown RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 DUS2Q9NX74 493 aaKnown RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 IGSF9Q9P2J2 1179 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 AGO1Q9UL18 857 aaKnown RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 VANGL2Q9ULK5 521 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 TPX2Q9ULW0 747 aaKnown RBP28.49■■■□□ 2.15
CCM2-218ENST00000541586 MYO10Q9HD67 2058 aa28.49■■■□□ 2.15
CCM2-218ENST00000541586 PPP1R12AO14974 1030 aaPredicted RBP28.48■■■□□ 2.15
CCM2-218ENST00000541586 GREM1O60565 184 aa28.48■■■□□ 2.15
CCM2-218ENST00000541586 TCF3P15923 654 aa28.48■■■□□ 2.15
CCM2-218ENST00000541586 GDI1P31150 447 aa28.48■■■□□ 2.15
CCM2-218ENST00000541586 HSPA9P38646 679 aaKnown RBP28.48■■■□□ 2.15
CCM2-218ENST00000541586 MTA1Q13330 715 aa28.48■■■□□ 2.15
CCM2-218ENST00000541586 PRKD1Q15139 912 aaPredicted RBP28.48■■■□□ 2.15
CCM2-218ENST00000541586 FAM182AQ5T1J6 154 aa28.48■■■□□ 2.15
CCM2-218ENST00000541586 TRIM68Q6AZZ1 485 aa28.48■■■□□ 2.15
CCM2-218ENST00000541586 TMC3Q7Z5M5 1100 aa28.48■■■□□ 2.15
CCM2-218ENST00000541586 SLC44A3Q8N4M1 653 aa28.48■■■□□ 2.15
CCM2-218ENST00000541586 VAV1P15498 845 aa28.47■■■□□ 2.15
CCM2-218ENST00000541586 HEATR6Q6AI08 1181 aaKnown RBP28.47■■■□□ 2.15
CCM2-218ENST00000541586 CCNYQ8ND76 341 aa28.47■■■□□ 2.15
CCM2-218ENST00000541586 NXPE3Q969Y0 559 aa28.47■■■□□ 2.15
CCM2-218ENST00000541586 PRMT1Q99873 361 aaKnown RBP28.47■■■□□ 2.15
CCM2-218ENST00000541586 KLC2Q9H0B6 622 aa28.47■■■□□ 2.15
CCM2-218ENST00000541586 MPP6Q9NZW5 540 aa28.47■■■□□ 2.15
CCM2-218ENST00000541586 HPCAL4Q9UM19 191 aa28.47■■■□□ 2.15
CCM2-218ENST00000541586 DHX9Q08211 1270 aaKnown RBP28.46■■■□□ 2.15
CCM2-218ENST00000541586 AP1B1Q10567 949 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 ACBD5Q5T8D3 534 aaPredicted RBP28.46■■■□□ 2.15
CCM2-218ENST00000541586 RNASEH2BQ5TBB1 312 aaKnown RBP28.46■■■□□ 2.15
CCM2-218ENST00000541586 RAP1GAP2Q684P5 730 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 LRRC31Q6UY01 552 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 DEPDC1BQ8WUY9 529 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 HTR3CQ8WXA8 447 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 VIPAS39Q9H9C1 493 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 HELZP42694 1942 aaKnown RBP28.46■■■□□ 2.15
CCM2-218ENST00000541586 GOLGA6L7A0A1B0GV03 622 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 NCAM2O15394 837 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 ACTN2P35609 894 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 IFNAR2P48551 515 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 SLC11A2P49281 568 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 FCHO2Q0JRZ9 810 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 GALNT2Q10471 571 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 NADSYN1Q6IA69 706 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 FBXL22Q6P050 247 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 TAB3Q8N5C8 712 aaPredicted RBP28.46■■■□□ 2.15
CCM2-218ENST00000541586 OSCP1Q8WVF1 389 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 ASIC4Q96FT7 647 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 NECAB3Q96P71 396 aaPredicted RBP28.46■■■□□ 2.15
CCM2-218ENST00000541586 TXLNGYQ9BZA5 131 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 PAK5Q9P286 719 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 PPARGC1AQ9UBK2 798 aaKnown RBP28.46■■■□□ 2.15
CCM2-218ENST00000541586 ZNF510Q9Y2H8 683 aa28.46■■■□□ 2.15
CCM2-218ENST00000541586 IGLV3-10A0A075B6K4 115 aa28.45■■■□□ 2.14
CCM2-218ENST00000541586 TRDMT1O14717 391 aaKnown RBP28.45■■■□□ 2.14
CCM2-218ENST00000541586 PPFIA2O75334 1257 aa28.45■■■□□ 2.14
CCM2-218ENST00000541586 TJAP1Q5JTD0 557 aa28.45■■■□□ 2.14
CCM2-218ENST00000541586 Q6ZNB5 142 aa28.45■■■□□ 2.14
CCM2-218ENST00000541586 RTL3Q8N8U3 475 aaKnown RBP28.45■■■□□ 2.14
CCM2-218ENST00000541586 CELF6Q96J87 481 aaKnown RBP28.45■■■□□ 2.14
CCM2-218ENST00000541586 EBF3Q9H4W6 596 aa28.45■■■□□ 2.14
CCM2-218ENST00000541586 BRD9Q9H8M2 597 aa28.45■■■□□ 2.14
CCM2-218ENST00000541586 TBC1D14Q9P2M4 693 aa28.45■■■□□ 2.14
CCM2-218ENST00000541586 C19orf67A6NJJ6 358 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 WASH4PA8MWX3 477 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 ACSL4O60488 711 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 GCATO75600 419 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 MX2P20592 715 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 CHKAP35790 457 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 TNK2Q07912 1038 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 MORF4L2Q15014 288 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 TPGS1Q6ZTW0 290 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 PCGF5Q86SE9 256 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 NLRP14Q86W24 1093 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 CHSY1Q86X52 802 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 TTC8Q8TAM2 541 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 CCDC110Q8TBZ0 833 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 P2RY11Q96G91 374 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms