RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 DNMT3LQ9UJW3 386 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 USH1CQ9Y6N9 552 aa9.74□□□□□ -0.85
TTC39C-203ENST00000540918 PCNTO95613 3336 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 A0A1W2PQ45 241 aaPredicted RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 A0A1W2PQY0 241 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TCRBV7S3A2A0A539 114 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TBC1D3BA6NDS4 549 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 SPAG6O75602 509 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 RTN3O95197 1032 aaPredicted RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 PCDH8O95206 1070 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 ITGB1P05556 798 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 RPS24P62847 133 aaKnown RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 LPIN1Q14693 890 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 GALNTL6Q49A17 601 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 DOK6Q6PKX4 331 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 AGMOQ6ZNB7 445 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 ZNF662Q6ZS27 426 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 GLT6D1Q7Z4J2 308 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 NECAB2Q7Z6G3 386 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CPT1BQ92523 772 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CYTH4Q9UIA0 394 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 PCDHGC4Q9Y5F7 938 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TJP1Q07157 1748 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 A0A0U1RQF3 1178 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 SCAMP1O15126 338 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 UBOX5O94941 541 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 RPLP2P05387 115 aaKnown RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 SLC10A3P09131 477 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 RALBP11234 206 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CCL5P13501 91 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CPA3P15088 417 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 ACAP1Q15027 740 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 B3GNT9Q6UX72 402 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 PDZD8Q8NEN9 1154 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 NAT14Q8WUY8 206 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 ART4Q93070 314 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 SYNDIG1Q9H7V2 258 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TRMT6Q9UJA5 497 aaKnown RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 SLC25A13Q9UJS0 675 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 MARF1Q9Y4F3 1742 aaKnown RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 DNAJC25-GNG10A0A024R161 153 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 C2orf71A6NGG8 1288 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CCT8L1PA6NM43 557 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 ARVCFO00192 962 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TPP1O14773 563 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 ADCY6O43306 1168 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 PIGRP01833 764 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CHRNA1P02708 482 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 PPP3CCP48454 512 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 NR2C2P49116 596 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 HDAC4P56524 1084 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 DAOAP59103 153 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CYP4F8P98187 520 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CDCA2Q69YH5 1023 aaPredicted RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 RETSATQ6NUM9 610 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TTC23LQ6PF05 361 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 SCIMPQ6UWF3 145 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 C17orf99Q6UX52 265 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TMC5Q6UXY8 1006 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 SLC26A9Q7LBE3 791 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 LONP2Q86WA8 852 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 PSTKQ8IV42 348 aaKnown RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 MSL3Q8N5Y2 521 aaKnown RBP9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TBL1YQ9BQ87 522 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 TRIM54Q9BYV2 358 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 ZYG11BQ9C0D3 744 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CCSER2Q9H7U1 834 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 PCDHGC3Q9UN70 934 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 AURKCQ9UQB9 309 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 SLC4A7Q9Y6M7 1214 aa9.73□□□□□ -0.85
TTC39C-203ENST00000540918 CES2O00748 559 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 SERPINB4P48594 390 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 NAGLUP54802 743 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 TAF11Q15544 211 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 PPM1JQ5JR12 505 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 NEPROQ6NW34 567 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
TTC39C-203ENST00000540918 IQCKQ8N0W5 287 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 RASGEF1CQ8N431 466 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 ZNF366Q8N895 744 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 DCBLD1Q8N8Z6 715 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 CALML6Q8TD86 181 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 DDX1Q92499 740 aaKnown RBP9.72□□□□□ -0.85
TTC39C-203ENST00000540918 MARK4Q96L34 752 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 HNRNPABQ99729 332 aaKnown RBP9.72□□□□□ -0.85
TTC39C-203ENST00000540918 ACTR5Q9H9F9 607 aaPredicted RBP9.72□□□□□ -0.85
TTC39C-203ENST00000540918 MAN1C1Q9NR34 630 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 PRPF4O43172 522 aaKnown RBP eCLIP9.72□□□□□ -0.85
TTC39C-203ENST00000540918 ZWINTO95229 277 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 CBX6O95503 412 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 METTL18O95568 372 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 ITGAVP06756 1048 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 MAP4P27816 1152 aaKnown RBP9.72□□□□□ -0.85
TTC39C-203ENST00000540918 CORO1AP31146 461 aaKnown RBP9.72□□□□□ -0.85
TTC39C-203ENST00000540918 PEX19P40855 299 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 KCNQ1P51787 676 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 CCDC157Q569K6 752 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 TTC7BQ86TV6 843 aa9.72□□□□□ -0.85
TTC39C-203ENST00000540918 ITIH5Q86UX2 942 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms