RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 KDM1BQ8NB78 822 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 OR7D4Q8NG98 312 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 OR2T3Q8NH03 318 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 CTNNBL1Q8WYA6 563 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ARHGEF26Q96DR7 871 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ZC3H10Q96K80 434 aaKnown RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 SPON2Q9BUD6 331 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 C2orf49Q9BVC5 232 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 PACSIN1Q9BY11 444 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 DUSP15Q9H1R2 295 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 DHX35Q9H5Z1 703 aaKnown RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 NHEJ1Q9H9Q4 299 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 CD93Q9NPY3 652 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 PRSS16Q9NQE7 514 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 SPTLC3Q9NUV7 552 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 GPATCH2LQ9NWQ4 482 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF212Q9UDV6 495 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 DNAI1Q9UI46 699 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 MBD1Q9UIS9 605 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 SLC25A13Q9UJS0 675 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ANAPC7Q9UJX3 599 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 NENFQ9UMX5 172 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 AP4E1Q9UPM8 1137 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 NEU3Q9UQ49 428 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 VPS13AQ96RL7 3174 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 IGHV1OR15-9A0A0B4J2B8 117 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 EDDM13A0A1B0GTR0 161 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ILVBLA1L0T0 632 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 CBX4O00257 560 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 PRPSAP2O60256 369 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 SIN3BO75182 1162 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 LRCH4O75427 683 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 H2AFZP0C0S5 128 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 VAV1P15498 845 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 GLDCP23378 1020 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 TPMTP51580 245 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 KRT83P78385 493 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 RPL6Q02878 288 aaKnown RBP9.46□□□□□ -0.9
SNHG1-215ENST00000540904 GNA12Q03113 381 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 SPEM2Q0P670 501 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 PIGHQ14442 188 aaPredicted RBP9.46□□□□□ -0.9
SNHG1-215ENST00000540904 CCDC6Q16204 474 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ERMARDQ5T6L9 678 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 C9orf64Q5T6V5 341 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 PMS2CLQ68D20 193 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF776Q68DI1 518 aaPredicted RBP9.46□□□□□ -0.9
SNHG1-215ENST00000540904 LINGO4Q6UY18 593 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF783Q6ZMS7 281 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 H2AFVQ71UI9 128 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ARMCX6Q7L4S7 300 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 LPCAT2Q7L5N7 544 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 NLRP14Q86W24 1093 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 TMEFF1Q8IYR6 380 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 DEFB119Q8N690 84 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 DCAF4L2Q8NA75 395 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ATP11CQ8NB49 1132 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 LOXL4Q96JB6 756 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 PEBP4Q96S96 227 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 PSMB7Q99436 277 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 EPAS1Q99814 870 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ANP32EQ9BTT0 268 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 SNRNP25Q9BV90 132 aaKnown RBP9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ARRDC1-AS1Q9H2J1 176 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 FBRSQ9HAH7 460 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ATP13A1Q9HD20 1204 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ITM2CQ9NQX7 267 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 NDFIP2Q9NV92 336 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 TMEM248Q9NWD8 314 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 CTTNBP2NLQ9P2B4 639 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 IP6K2Q9UHH9 426 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 VPS51Q9UID3 782 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 USP18Q9UMW8 372 aa9.46□□□□□ -0.9
SNHG1-215ENST00000540904 ZFHX2Q9C0A1 2572 aaPredicted RBP9.46□□□□□ -0.9
SNHG1-215ENST00000540904 TARSL2A2RTX5 802 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 K7ERQ8 282 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 MYO1FO00160 1098 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 ATP9BO43861 1147 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 BNIP3LO60238 219 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 RAMP2O60895 175 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 RNASEH1O60930 286 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 NDUFS2O75306 463 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 MT-CO1P00395 513 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 IL1R2P27930 398 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 CD6P30203 668 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 PCK1P35558 622 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 ACVRL1P37023 503 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 ETFBP38117 255 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 SSR1P43307 286 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 MAPKAPK2P49137 400 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 DHPSP49366 369 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 TPI1P60174 286 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 RPS14P62263 151 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 CREB5Q02930 508 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 SEMA3BQ13214 749 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 ACAP1Q15027 740 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 DLG2Q15700 870 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 CA9Q16790 459 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms