RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 SLC39A13Q96H72 371 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 FCRL2Q96LA5 508 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-212ENST00000539975 LRRC3BQ96PB8 259 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 TSGA10Q9BZW7 698 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 ZWILCHQ9H900 591 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 TBC1D17Q9HA65 648 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 ARHGEF4Q9NR80 690 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 PIGVQ9NUD9 493 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 DNAJC17Q9NVM6 304 aaKnown RBP6.68□□□□□ -1.34
SNHG1-212ENST00000539975 OR12D3Q9UGF7 316 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 PLA2G4CQ9UP65 541 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 SLC8A2Q9UPR5 921 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 KCNMB2Q9Y691 235 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 MYO7AQ13402 2215 aa6.68□□□□□ -1.34
SNHG1-212ENST00000539975 SZT2Q5T011 3432 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 TMEM110-MUSTN1A8MSY1 372 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 HOXC11O43248 304 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CCP110O43303 1012 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 SPOPO43791 374 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CREB3O43889 395 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CLDN11O75508 207 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ENDOD1O94919 500 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 KAT7O95251 611 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 GJB6O95452 261 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 IGLV3-25P01717 112 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ATP5BP06576 529 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 KRT7P08729 469 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CCDC175P0C221 793 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 MSNP26038 577 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 HTR7P34969 479 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 PCK1P35558 622 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ARL4AP40617 200 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CETN2P41208 172 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 SLC1A1P43005 524 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 TNFRSF4P43489 277 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 GALK1P51570 392 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CLCN5P51795 746 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 VCPP55072 806 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 STARD6P59095 220 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ST8SIA6P61647 398 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CCDC173Q0VFZ6 552 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 SLC12A1Q13621 1099 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 AUHQ13825 339 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 KRT81Q14533 505 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 MESDQ14696 234 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 PON2Q15165 354 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ASTE1Q2TB18 679 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 MS4A13Q5J8X5 152 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ERMARDQ5T6L9 678 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 PIK3R6Q5UE93 754 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ALKBH2Q6NS38 261 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 RFWD3Q6PCD5 774 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ZNF354CQ86Y25 554 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 PSTKQ8IV42 348 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 LRRC8AQ8IWT6 810 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 SYCE1Q8N0S2 351 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CARNMT1Q8N4J0 409 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 KCTD6Q8NC69 237 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CENPIQ92674 756 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 NTAN1Q96AB6 310 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 MAK16Q9BXY0 300 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 OSBPL6Q9BZF3 934 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ZYG11BQ9C0D3 744 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 DHX35Q9H5Z1 703 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 RETREG1Q9H6L5 497 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CATSPERBQ9H7T0 1116 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 HPS4Q9NQG7 708 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 ARHGEF38Q9NXL2 777 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 DNAJB12Q9NXW2 375 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 PLK2Q9NYY3 685 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 KIAA1522Q9P206 1035 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 PCSK1NQ9UHG2 260 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 STOML2Q9UJZ1 356 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 VANGL2Q9ULK5 521 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 HPCAL4Q9UM19 191 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 USP18Q9UMW8 372 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 SLC6A14Q9UN76 642 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 MTCL1Q9Y4B5 1905 aaKnown RBP6.67□□□□□ -1.34
SNHG1-212ENST00000539975 CDH23Q9H251 3354 aa6.67□□□□□ -1.34
SNHG1-212ENST00000539975 A0A0A6YYK5 440 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 GOLGA6L7A0A1B0GV03 622 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 A0A1B0GVM2 712 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 KRBA1A5PL33 1030 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 TCAF2A6NFQ2 919 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 PRR33A8MZF0 331 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 E9PAM4 449 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 ARNTLO00327 626 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 EEF2KO00418 725 aaKnown RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 TRDMT1O14717 391 aaKnown RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 NPC1O15118 1278 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 FGF10O15520 208 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 ZSCAN12O43309 604 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 CACNG3O60359 315 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 TULP3O75386 442 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 SASH3O75995 380 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 PROSCO94903 275 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 LUC7L3O95232 432 aaKnown RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 LCA5LO95447 670 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 RARAP10276 462 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 POLR2EP19388 210 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms