RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 SPAG7O75391 227 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 IL1BP01584 269 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 IGLV3-27P01718 113 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 AMHP03971 560 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 ZDHHC11BP0C7U3 371 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 CSH1P0DML2 217 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 CSH2P0DML3 217 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 TROVE2P10155 538 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPARC-209ENST00000539687 CREB1P16220 341 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 LAG3P18627 525 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 PAMP19021 973 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 TAC1P20366 129 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 MGAT1P26572 445 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 RPA3P35244 121 aaPredicted RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 GP5P40197 560 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 MAGEA9P43362 315 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 RABGGTBP53611 331 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 SESN2P58004 480 aaPredicted RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 YBEYP58557 167 aaPredicted RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 FAAP100Q0VG06 881 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 TAF10Q12962 218 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 IFT88Q13099 833 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 HNRNPDQ14103 355 aaKnown RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 CRYMQ14894 314 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 VEPH1Q14D04 833 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 EFTUD2Q15029 972 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPARC-209ENST00000539687 PSMD5Q16401 504 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 DDR2Q16832 855 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 UGP2Q16851 508 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 PARP15Q460N3 678 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 LACTB2Q53H82 288 aaPredicted RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 RNF187Q5TA31 235 aaPredicted RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 GRTP1Q5TC63 336 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 TMCO4Q5TGY1 634 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 SNX30Q5VWJ9 437 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 KCTD11Q693B1 232 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 KIAA1841Q6NSI8 718 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 FOXR1Q6PIV2 292 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 LVRNQ6Q4G3 990 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 CCDC91Q7Z6B0 441 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 LCA5Q86VQ0 697 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 BBS5Q8N3I7 341 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPARC-209ENST00000539687 GDAP1Q8TB36 358 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 AZIN2Q96A70 460 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 MRRFQ96E11 262 aaKnown RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 PGLYRP2Q96PD5 576 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 DDX50Q9BQ39 737 aaKnown RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 ELAC2Q9BQ52 826 aaKnown RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 PRKD2Q9BZL6 878 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 MRM3Q9HC36 420 aaKnown RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 VPS45Q9NRW7 570 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 ZFATQ9P243 1243 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 AFF4Q9UHB7 1163 aaKnown RBP10.39□□□□□ -0.75
SPARC-209ENST00000539687 NEU3Q9UQ49 428 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 SSX2IPQ9Y2D8 614 aa10.39□□□□□ -0.75
SPARC-209ENST00000539687 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.38□□□□□ -0.75
SPARC-209ENST00000539687 A0A1W2PPM1 405 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 WDR27A2RRH5 827 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 CCT8L1PA6NM43 557 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 SLC38A8A6NNN8 435 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 TRIM49D1C9J1S8 452 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 MYO1CO00159 1063 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 TIMM44O43615 452 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 GLRA3O75311 464 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 OAS1P00973 400 aaKnown RBP10.38□□□□□ -0.75
SPARC-209ENST00000539687 JCHAINP01591 159 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 C1QAP02745 245 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 NEFHP12036 1026 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 NFKB1P19838 968 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 CRHR1P34998 444 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 PPM1AP35813 382 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 POLD2P49005 469 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 SLC11A2P49281 568 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 NEK3P51956 506 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 CSE1LP55060 971 aaKnown RBP10.38□□□□□ -0.75
SPARC-209ENST00000539687 ARPP19P56211 112 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 WDR4P57081 412 aaKnown RBP10.38□□□□□ -0.75
SPARC-209ENST00000539687 TNK2Q07912 1038 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 NIPAL4Q0D2K0 466 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 CCDC15Q0P6D6 951 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 EFEMP1Q12805 493 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 MPP3Q13368 585 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 PLD1Q13393 1074 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 MPP2Q14168 576 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 SETDB1Q15047 1291 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 QPCTQ16769 361 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 INSCQ1MX18 579 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 SPDYAQ5MJ70 313 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 RTP2Q5QGT7 225 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 C10orf120Q5SQS8 335 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 SYCP2LQ5T4T6 812 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 ATG16L1Q676U5 607 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 RNF43Q68DV7 783 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 KYAT3Q6YP21 454 aaKnown RBP10.38□□□□□ -0.75
SPARC-209ENST00000539687 TMEM135Q86UB9 458 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 RASSF3Q86WH2 238 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 ARHGAP12Q8IWW6 846 aa10.38□□□□□ -0.75
SPARC-209ENST00000539687 CMTR2Q8IYT2 770 aaKnown RBP10.38□□□□□ -0.75
SPARC-209ENST00000539687 RNF168Q8IYW5 571 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms