RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 EPN1Q9Y6I3 576 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 K7ERQ8 282 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 ATP5BP06576 529 aaKnown RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 ACAP1Q15027 740 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 PPP6R3Q5H9R7 873 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 SDE2Q6IQ49 451 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 LINGO4Q6UY18 593 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 SETD3Q86TU7 594 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 CACUL1Q86Y37 369 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 TMTC1Q8IUR5 882 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 FAM160A2Q8N612 972 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 HSPH1Q92598 858 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 BAG1Q99933 345 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 FAM126AQ9BYI3 521 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 KLC2Q9H0B6 622 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 POLMQ9NP87 494 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 PRSS16Q9NQE7 514 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 KLHL11Q9NVR0 708 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 CWC15Q9P013 229 aaKnown RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 VPS51Q9UID3 782 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 HYOU1Q9Y4L1 999 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 CHD5Q8TDI0 1954 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 ZMPSTE24O75844 475 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 MTA2O94776 668 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 MOCS3O95396 460 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 CD160O95971 181 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 ASLP04424 464 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 CD48P09326 243 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 DESP17661 470 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 GJC1P36383 396 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 NRLP54845 237 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 GNA12Q03113 381 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 LPAL2Q16609 132 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 C6orf118Q5T5N4 469 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 LEKR1Q6ZMV7 388 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 TP53INP2Q8IXH6 220 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 RTL3Q8N8U3 475 aaKnown RBP16.15■□□□□ 0.18
RPAIN-206ENST00000539417 RFFLQ8WZ73 363 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 MRGPRX1Q96LB2 322 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 SPON2Q9BUD6 331 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 GOLPH3Q9H4A6 298 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 INTUQ9ULD6 942 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 DUSP10Q9Y6W6 482 aa16.15■□□□□ 0.18
RPAIN-206ENST00000539417 ILVBLA1L0T0 632 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 EEF2KO00418 725 aaKnown RBP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 NPC1O15118 1278 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 SMAD6O43541 496 aaKnown RBP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 SIN3BO75182 1162 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 SRPRAP08240 638 aaKnown RBP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 BCKDHBP21953 392 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 CYLC1P35663 651 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 SSR1P43307 286 aaKnown RBP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 TPI1P60174 286 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 ARF5P84085 180 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 CAMK2GQ13555 558 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 C9orf64Q5T6V5 341 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 PGBD3Q8N328 593 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 FRS2Q8WU20 508 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 PTPRN2Q92932 1015 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 ARHGEF2Q92974 986 aaKnown RBP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 EPAS1Q99814 870 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 DESI2Q9BSY9 194 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 ACE2Q9BYF1 805 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 LACRTQ9GZZ8 138 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 IRF2BPLQ9H1B7 796 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 PCDH18Q9HCL0 1135 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 ETNK2Q9NVF9 386 aa16.14■□□□□ 0.17
RPAIN-206ENST00000539417 BCCIPQ9P287 314 aaKnown RBP eCLIP16.14■□□□□ 0.17
RPAIN-206ENST00000539417 CCDC163A0A0D9SF12 145 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 WASH4PA8MWX3 477 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 MAPKAPK2P49137 400 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 ARSEP51690 589 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 OXCT1P55809 520 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 MMRN1Q13201 1228 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 DPYSQ14117 519 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 TCEAL1Q15170 157 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 DPYSL2Q16555 572 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 RFX8Q6ZV50 586 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 ASCL5Q7RTU5 278 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 RHOT2Q8IXI1 618 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 NPWQ8N729 165 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 DCAF4L2Q8NA75 395 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 SUMF1Q8NBK3 374 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 CELF6Q96J87 481 aaKnown RBP16.13■□□□□ 0.17
RPAIN-206ENST00000539417 ATP13A1Q9HD20 1204 aa16.13■□□□□ 0.17
RPAIN-206ENST00000539417 MBD1Q9UIS9 605 aaPredicted RBP16.13■□□□□ 0.17
RPAIN-206ENST00000539417 NYNRINQ9P2P1 1898 aaKnown RBP16.13■□□□□ 0.17
RPAIN-206ENST00000539417 GOLGA6L3A6NEY3 463 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 PROB1E7EW31 1015 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 RNF103O00237 685 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 CBX4O00257 560 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 SYNCRIPO60506 623 aaKnown RBP16.12■□□□□ 0.17
RPAIN-206ENST00000539417 ALDH1A2O94788 518 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 SRCP12931 536 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 ERCC2P18074 760 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 AMPD1P23109 780 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 IL4RP24394 825 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 ST8SIA6P61647 398 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 STARD3Q14849 445 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms