RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DCUN1D5Q9BTE7 237 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 GATA5Q9BWX5 397 aaPredicted RBP18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 SUCOQ9UBS9 1254 aaKnown RBP18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 COQ6Q9Y2Z9 468 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 PSMD12O00232 456 aaPredicted RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 CSPG5O95196 566 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 TFPTP0C1Z6 253 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 CDH15P55291 814 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 RHDQ02161 417 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 TRIM25Q14258 630 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 DCLK2Q8N568 766 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 FAM156AQ8NDB6 213 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 ADAM32Q8TC27 787 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 SGF29Q96ES7 293 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 ABHD8Q96I13 439 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 PPP1R36Q96LQ0 422 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 TRPV6Q9H1D0 765 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 SLC38A7Q9NVC3 462 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 PTBP2Q9UKA9 531 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 KIAA1217Q5T5P2 1943 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 ZNF646O15015 1829 aaPredicted RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 FUOMA2VDF0 154 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 C9IYK1 514 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 FBP2O00757 339 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 HTRA2O43464 458 aaPredicted RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 CHRNGP07510 517 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 NR3C2P08235 984 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 MCF2P10911 925 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 MGAT1P26572 445 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 SESN2P58004 480 aaPredicted RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 GBE1Q04446 702 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 CA9Q16790 459 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 HEATR6Q6AI08 1181 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 ADAMTS16Q8TE57 1224 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 QKIQ96PU8 341 aaKnown RBP eCLIP18.95■□□□□ 0.623e-8■■■■□ 25.6
SFSWAP-207ENST00000538548 SLC29A1Q99808 456 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 SNRNP25Q9BV90 132 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 BCO2Q9BYV7 579 aa18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 PAIP1Q9H074 479 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 MRPL40Q9NQ50 206 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-207ENST00000538548 CLRN2A0PK11 232 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 ZNF487B1APH4 448 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 ALDH2P05091 517 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 PSMD8P48556 350 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 CTBSQ01459 385 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 KCNT2Q6UVM3 1135 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 DCDC5Q6ZRR9 648 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 CLEC14AQ86T13 490 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 DDHD1Q8NEL9 900 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 THAP11Q96EK4 314 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 C20orf96Q9NUD7 363 aaPredicted RBP18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 OXSMQ9NWU1 459 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 CDYLQ9Y232 598 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 TCAF2A6NFQ2 919 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 MDM4O15151 490 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 HOXC6P09630 235 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 OCM2P0CE71 109 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 OCMP0CE72 109 aaPredicted RBP18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 ERVK-10P10266 1014 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 COL6A2P12110 1019 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 CYP2F1P24903 491 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 CDH8P55286 799 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 CCDC14Q49A88 953 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 MTX3Q5HYI7 312 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 NHSL2Q5HYW2 709 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 TMEM198Q66K66 360 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 OR6B2Q6IFH4 312 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 FAM47BQ8NA70 645 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 SLC7A14Q8TBB6 771 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 TWNKQ96RR1 684 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 YIPF2Q9BWQ6 316 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 DRC3Q9H069 523 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 NGRNQ9NPE2 291 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 ANLNQ9NQW6 1124 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 UTP6Q9NYH9 597 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 ADA2Q9NZK5 511 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 SELENONQ9NZV5 590 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 SNX13Q9Y5W8 968 aa18.94■□□□□ 0.62
SFSWAP-207ENST00000538548 OGTO15294 1046 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 TNNC2P02585 160 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 LTFP02788 710 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 FGFR3P22607 806 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 HMGB2P26583 209 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 NR2C2P49116 596 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 ZNF667Q5HYK9 610 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 FASTKD5Q7L8L6 764 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 FAM151AQ8WW52 585 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 CERS2Q96G23 380 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 PIWIL1Q96J94 861 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 UHRF1Q96T88 793 aaPredicted RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 RBBP8Q99708 897 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 HNRNPABQ99729 332 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 NMRAL1Q9HBL8 299 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 VTI1BQ9UEU0 232 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 MID2Q9UJV3 735 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 DOCK5Q9H7D0 1870 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 A0A096LPK6 155 aa18.93■□□□□ 0.62
SFSWAP-207ENST00000538548 SLCO1B7G3V0H7 640 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms