RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TRIP11Q15643 1979 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 GOLGA8QA0A0J9YX86 632 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 GOLGA8OA6NCC3 632 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 GOLGA8NF8WBI6 632 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 H0YJX3 145 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 RNF103O00237 685 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 MATN2O00339 956 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 CAPN15O75808 1086 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 FAM58BPP0C7Q3 252 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 CLCN3P51790 818 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 CRADDP78560 199 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 ARHGAP1Q07960 439 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 LAMC2Q13753 1193 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 SLC10A6Q3KNW5 377 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 NADK2Q4G0N4 442 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 KLHDC10Q6PID8 442 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 SNX32Q86XE0 403 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 DSELQ8IZU8 1212 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 MAPK15Q8TD08 544 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 ITFG2Q969R8 447 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 IL22Q9GZX6 179 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 MINDY3Q9H8M7 445 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 SPON1Q9HCB6 807 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 PDGFCQ9NRA1 345 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 UBAP1Q9NZ09 502 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 VTI1BQ9UEU0 232 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 ANKRD6Q9Y2G4 727 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 RPS6KL1Q9Y6S9 549 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 COL1A2P08123 1366 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 CITO14578 2027 aa12.4□□□□□ -0.42
CPSF7-218ENST00000537641 A0A096LPK6 155 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 HDAC3O15379 428 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 TIMM44O43615 452 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 MFSD11O43934 449 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 TADA2AO75478 443 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 GJB1P08034 283 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 SRGAP2BP0DMP2 458 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 ERVK-10P10266 1014 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 ME2P23368 584 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 DNAJB1P25685 340 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 PSMB4P28070 264 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 PPARGP37231 505 aaPredicted RBP12.4□□□□□ -0.43
CPSF7-218ENST00000537641 HADHAP40939 763 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 RPL34P49207 117 aaKnown RBP12.4□□□□□ -0.43
CPSF7-218ENST00000537641 THOP1P52888 689 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 MYBPC1Q00872 1141 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 CYLC2Q14093 348 aaPredicted RBP12.4□□□□□ -0.43
CPSF7-218ENST00000537641 PDK1Q15118 436 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 AMHR2Q16671 573 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 SEL1L3Q68CR1 1132 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 NAPRTQ6XQN6 538 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 ARMCX2Q7L311 632 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 CMC1Q7Z7K0 106 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 PLD6Q8N2A8 252 aaKnown RBP12.4□□□□□ -0.43
CPSF7-218ENST00000537641 TMEM130Q8N3G9 435 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 METTL25Q8N6Q8 603 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 CNTD1Q8N815 330 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.4□□□□□ -0.43
CPSF7-218ENST00000537641 PGBD4Q96DM1 585 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 P2RY11Q96G91 374 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 OR52B2Q96RD2 323 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 GATA5Q9BWX5 397 aaPredicted RBP12.4□□□□□ -0.43
CPSF7-218ENST00000537641 SLC2A11Q9BYW1 496 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 DRC3Q9H069 523 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF358Q9NW07 568 aa12.4□□□□□ -0.43
CPSF7-218ENST00000537641 UTRNP46939 3433 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 AIM2O14862 343 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 BCAS2O75934 225 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-218ENST00000537641 LGALS2P05162 132 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 CCDC166P0CW27 439 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 GOT1P17174 413 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 XRCC1P18887 633 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-218ENST00000537641 TFE3P19532 575 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-218ENST00000537641 EPHX2P34913 555 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 SERPINB5P36952 375 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 ACADSBP45954 432 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 NR1H2P55055 460 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 CCNA1P78396 465 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 MRPS22P82650 360 aaKnown RBP12.39□□□□□ -0.43
CPSF7-218ENST00000537641 HPCAP84074 193 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-218ENST00000537641 PRKAA1Q13131 559 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 DPYSQ14117 519 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 LDLRAD1Q5T700 205 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 C9orf131Q5VYM1 1079 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 LIPMQ5VYY2 423 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 ZYG11AQ6WRX3 759 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 STRA8Q7Z7C7 330 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 UNC93AQ86WB7 457 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 CCDC185Q8N715 623 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 LINC01465Q8N7H1 131 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 C12orf29Q8N999 325 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 KBTBD7Q8WVZ9 684 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 GFM2Q969S9 779 aaKnown RBP12.39□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF669Q96BR6 464 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-218ENST00000537641 AGAP3Q96P47 875 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 OXCT2Q9BYC2 517 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms