RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TCF7L2Q9NQB0 619 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 UBE4BO95155 1302 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 DLEC1Q9Y238 1755 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 C5P01031 1676 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 MAGEB6P1A0A0J9YX57 407 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PDZK1P1A8MUH7 402 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 H0YC42 278 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 INO80B-WBP1J3KQ70 363 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 CYB561D2O14569 222 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 BANF1O75531 89 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PTTG1O95997 202 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 C7P10643 843 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 FGFR3P22607 806 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 EEF1B2P24534 225 aaKnown RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC7A1P30825 629 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC26A3P40879 764 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 TPD52P55327 224 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PKNOX1P55347 436 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 GBE1Q04446 702 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ART3Q13508 389 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 CEACAM7Q14002 265 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 GNA13Q14344 377 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 DGUOKQ16854 277 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 BMT2Q1RMZ1 405 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SYCE2Q6PIF2 218 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ZNF773Q6PK81 442 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 CRTC3Q6UUV7 619 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 CDR2LQ86X02 465 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SNX29P2Q8IUI4 249 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 GALNT11Q8NCW6 608 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC2A14Q8TDB8 520 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ZFP90Q8TF47 636 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ASB9Q96DX5 294 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 RHOBTB2Q9BYZ6 727 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 POLE4Q9NR33 117 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SMOXQ9NWM0 555 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 LRP2BPQ9P2M1 347 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 DNPEPQ9ULA0 475 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 KIAA1024Q9UPX6 916 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 AP3M1Q9Y2T2 418 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PLCH1Q4KWH8 1693 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SAGE2PA6NJ88 616 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SAC3D1A6NKF1 404 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 C16orf96A6NNT2 1141 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 A8MX80 341 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 TRIM77I1YAP6 450 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ERVH48-1M5A8F1 160 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 TRIM38O00635 465 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC9A3R1O14745 358 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 CLIC2O15247 247 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ENTPD3O75355 529 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ASNSP08243 561 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 DBTP11182 482 aaKnown RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PIK3R1P27986 724 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 CD40LGP29965 261 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 CRHR1P34998 444 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 MSX2P35548 267 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PTPN9P43378 593 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 POU6F2P78424 691 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 MRPS5P82675 430 aaKnown RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ECM1Q16610 540 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC36A3Q495N2 470 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 AGAP6Q5VW22 663 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 BROXQ5VW32 411 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 ZCCHC23Q6ZST2 131 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 KATNAL2Q8IYT4 538 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SCML4Q8N228 414 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SFRP1Q8N474 314 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 POC5Q8NA72 575 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 GLIS1Q8NBF1 620 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 BEST2Q8NFU1 509 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 OR10Z1Q8NGY1 313 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 LHFPL5Q8TAF8 219 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SNX19Q92543 992 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 SEPT8Q92599 483 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 REXO5Q96IC2 774 aaKnown RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 DACH2Q96NX9 599 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 AGAP4Q96P64 663 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 UHRF1Q96T88 793 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PCDHB18PQ96TA0 734 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 IL12RB2Q99665 862 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 C17orf62Q9BQA9 187 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 RSPH9Q9H1X1 276 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 NOL11Q9H8H0 719 aaKnown RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 LIN7BQ9HAP6 207 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PCDHGC3Q9UN70 934 aa8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 MN1Q10571 1320 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-202ENST00000537556 PCP4L1A6NKN8 68 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 C12orf71A8MTZ7 269 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 NMT2O60551 498 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TRIM16O95361 564 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 NDST3O95803 873 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 GNAO1P09471 354 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 BMP2P12643 396 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ENO3P13929 434 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms