RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SPATA31A7Q8IWB4 1347 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 TCRBV7S3A2A0A539 114 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 RRHO14718 337 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 ZBED4O75132 1171 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 CBX6O95503 412 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 CENPBP07199 599 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-208ENST00000536710 HSPA1AP0DMV8 641 aaKnown RBP5.85□□□□□ -1.47
PRKDC-208ENST00000536710 HSPA1BP0DMV9 641 aaKnown RBP5.85□□□□□ -1.47
PRKDC-208ENST00000536710 WT1P19544 449 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-208ENST00000536710 CHMP24386 653 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 ZXDCQ2QGD7 858 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-208ENST00000536710 ZNF766Q5HY98 468 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 C10orf76Q5T2E6 689 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 PRAMEF17Q5VTA0 474 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 NAPEPLDQ6IQ20 393 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 OLFML1Q6UWY5 402 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 KLBQ86Z14 1044 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 DIS3L2Q8IYB7 885 aaKnown RBP5.85□□□□□ -1.47
PRKDC-208ENST00000536710 IP6K1Q92551 441 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 SARAFQ96BY9 339 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 TIGD1Q96MW7 591 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 FCRL5Q96RD9 977 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 CLSTN3Q9BQT9 956 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 TMEM248Q9NWD8 314 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 TAS2R10Q9NYW0 307 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 IL1RAPL1Q9NZN1 696 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 UPB1Q9UBR1 384 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 SLC25A10Q9UBX3 287 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-208ENST00000536710 IPO11Q9UI26 975 aaKnown RBP5.85□□□□□ -1.47
PRKDC-208ENST00000536710 DTX4Q9Y2E6 619 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 GOLGA6L10A0A0M3HER8 536 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 FSD2A1L4K1 749 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 GAGE10A6NGK3 116 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 TEX22C9J3V5 150 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 F5H0A9 414 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-208ENST00000536710 USO1O60763 962 aaKnown RBP5.84□□□□□ -1.47
PRKDC-208ENST00000536710 TMEM63AO94886 807 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 NFATC1O95644 943 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 URODP06132 367 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 UBL4AP11441 157 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 TNFRSF1AP19438 455 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 GJC1P36383 396 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 SKIV2L2P42285 1042 aaKnown RBP5.84□□□□□ -1.47
PRKDC-208ENST00000536710 MTNR1AP48039 350 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 NAP1L1P55209 391 aaKnown RBP5.84□□□□□ -1.47
PRKDC-208ENST00000536710 UFM1P61960 85 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 TBCEQ15813 527 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-208ENST00000536710 GJB7Q6PEY0 223 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 ZNF474Q6S9Z5 364 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-208ENST00000536710 TMTC3Q6ZXV5 915 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 B4GALNT4Q76KP1 1039 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 RTL10Q7L3V2 364 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 MRGPRGQ86SM5 289 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 CNTROBQ8N137 903 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 SCAIQ8N9R8 606 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 DNAAF1Q8NEP3 725 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 ADAMTS15Q8TE58 950 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 RAB40AQ8WXH6 277 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 CUL5Q93034 780 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 C5orf34Q96MH7 638 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 ASB2Q96Q27 587 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 EFHD1Q9BUP0 239 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 USP44Q9H0E7 712 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 ERVK-5Q9HDB9 667 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 SEMA4BQ9NPR2 832 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-208ENST00000536710 HCN3Q9P1Z3 774 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 SARDHQ9UL12 918 aa5.84□□□□□ -1.47
PRKDC-208ENST00000536710 TEX13CA0A0J9YWL9 993 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 ANKRD18BA2A2Z9 1011 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 PI4KAP2A4QPH2 592 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 INPPL1O15357 1258 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 MSI1O43347 362 aaKnown RBP5.83□□□□□ -1.48
PRKDC-208ENST00000536710 CEP104O60308 925 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 TIPRLO75663 272 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 HLA-DQA2P01906 255 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 CHRM4P08173 479 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 NHLRC4P0CG21 123 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-208ENST00000536710 CYP2A6P11509 494 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-208ENST00000536710 FCGR2AP12318 317 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 EPHA8P29322 1005 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-208ENST00000536710 SOX2P48431 317 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 YPEL5P62699 121 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 SETQ01105 290 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-208ENST00000536710 NEXNQ0ZGT2 675 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 DCTN2Q13561 401 aaKnown RBP5.83□□□□□ -1.48
PRKDC-208ENST00000536710 GALNT3Q14435 633 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 SLC18A3Q16572 532 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 PRICKLE4Q2TBC4 344 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 CFAP161Q6P656 301 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 RBM44Q6ZP01 1051 aaKnown RBP5.83□□□□□ -1.48
PRKDC-208ENST00000536710 RRM2BQ7LG56 351 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 EXD3Q8N9H8 876 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 FAM47BQ8NA70 645 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 OR52N4Q8NGI2 321 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 GPR150Q8NGU9 434 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 METTL6Q8TCB7 284 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 HSPH1Q92598 858 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 SDF4Q9BRK5 362 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 IFT27Q9BW83 186 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 TM2D2Q9BX73 214 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms