RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MCM5P33992 734 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 FHL3Q13643 280 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 FAM110CQ1W6H9 321 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 CCDC57Q2TAC2 916 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 C9orf50Q5SZB4 431 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 ZKSCAN2Q63HK3 967 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 CDC42EP5Q6NZY7 148 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 CLEC9AQ6UXN8 241 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 SFTPA1Q8IWL2 248 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 SCYL3Q8IZE3 742 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 VGLL2Q8N8G2 317 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 LINS1Q8NG48 757 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 TBC1D22AQ8WUA7 517 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 ZNF668Q96K58 619 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-207ENST00000536634 HIST1H2AAQ96QV6 131 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 SH2D3AQ9BRG2 576 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 HEYLQ9NQ87 328 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-207ENST00000536634 AGTPBP1Q9UPW5 1226 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 SLC27A6Q9Y2P4 619 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 PCSK5Q92824 1860 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 RFX7Q2KHR2 1363 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 CYP2D6P10635 497 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 APEHP13798 732 aaKnown RBP6.2□□□□□ -1.42
CLIP1-207ENST00000536634 CYP2B6P20813 491 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 FGFR2P21802 821 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 CCND3P30281 292 aaPredicted RBP6.2□□□□□ -1.42
CLIP1-207ENST00000536634 HTR7P34969 479 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 ABCG1P45844 678 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 STT3AP46977 705 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 DEUP1Q05D60 604 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 SHHQ15465 462 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 LRRC24Q50LG9 513 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 FAM122AQ96E09 287 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 LRRC46Q96FV0 321 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 KAZALD1Q96I82 304 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 FAM227BQ96M60 508 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 ASB2Q96Q27 587 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 TRIM36Q9NQ86 728 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 RLFQ13129 1914 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 CACNA1FO60840 1977 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 ATAD5Q96QE3 1844 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 C5orf42Q9H799 3197 aa6.2□□□□□ -1.42
CLIP1-207ENST00000536634 MYH2Q9UKX2 1941 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 A0A1W2PPC4 97 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 CLCA1A8K7I4 914 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 ADAMTS3O15072 1205 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 FRAT2O75474 233 aaPredicted RBP6.19□□□□□ -1.42
CLIP1-207ENST00000536634 RBL1P28749 1068 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 COPB1P53618 953 aaKnown RBP6.19□□□□□ -1.42
CLIP1-207ENST00000536634 COPAP53621 1224 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 WDR43Q15061 677 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLIP1-207ENST00000536634 CCL14Q16627 93 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 AWAT1Q58HT5 328 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 CEP78Q5JTW2 689 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 BEND3Q5T5X7 828 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 MZT2AQ6P582 158 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 SERPINA13PQ6UXR4 307 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 ZDHHC12Q96GR4 267 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 LBHD1Q9BQE6 289 aaPredicted RBP6.19□□□□□ -1.42
CLIP1-207ENST00000536634 SLC25A32Q9H2D1 315 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 MYO1AQ9UBC5 1043 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 MGAT4CQ9UBM8 478 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 MROH5Q6ZUA9 1318 aa6.19□□□□□ -1.42
CLIP1-207ENST00000536634 DNAJC9-AS1A6NH13 148 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 DDTLA6NHG4 134 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-207ENST00000536634 POC1B-GALNT4F8VUJ3 575 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 GRM8O00222 908 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 NCK2O43639 380 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 SNX2O60749 519 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 EPHB2P29323 1055 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 ATICP31939 592 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 RALBP1Q15311 655 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 FAM187BQ17R55 369 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 TWISTNBQ3B726 338 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-207ENST00000536634 CRTC1Q6UUV9 634 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 CATSPERGQ6ZRH7 1159 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 GALNT4Q8N4A0 578 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 LINC01465Q8N7H1 131 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 C5orf34Q96MH7 638 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 QTRT1Q9BXR0 403 aaKnown RBP6.18□□□□□ -1.42
CLIP1-207ENST00000536634 TXNRD2Q9NNW7 524 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 DDX4Q9NQI0 724 aaKnown RBP6.18□□□□□ -1.42
CLIP1-207ENST00000536634 SNX15Q9NRS6 342 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 GEMIN8Q9NWZ8 242 aaKnown RBP6.18□□□□□ -1.42
CLIP1-207ENST00000536634 NKX1-2Q9UD57 310 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-207ENST00000536634 STEAP1Q9UHE8 339 aa6.18□□□□□ -1.42
CLIP1-207ENST00000536634 TCF20Q9UGU0 1960 aaKnown RBP6.17□□□□□ -1.42
CLIP1-207ENST00000536634 A8MVJ9 347 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 APOL1O14791 398 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 AREL1O15033 823 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 TMPRSS11DO60235 418 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 ARP10275 920 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 CYP2A6P11509 494 aaPredicted RBP6.17□□□□□ -1.42
CLIP1-207ENST00000536634 HMGCS2P54868 508 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 CALD1Q05682 793 aaKnown RBP6.17□□□□□ -1.42
CLIP1-207ENST00000536634 SPP2Q13103 211 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 PMS2P11Q13670 270 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 HLTFQ14527 1009 aaKnown RBP eCLIP6.17□□□□□ -1.42
CLIP1-207ENST00000536634 CAVIN4Q5BKX8 364 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 MBD3L2Q8NHZ7 208 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms