RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 NCAPGQ9BPX3 1015 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 FAM126AQ9BYI3 521 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MUC3BQ9H195 1237 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SLC6A17Q9H1V8 727 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 POLMQ9NP87 494 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CD93Q9NPY3 652 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CWC15Q9P013 229 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 VPS51Q9UID3 782 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SLCO3A1Q9UIG8 710 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SALL4Q9UJQ4 1053 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 VPS28Q9UK41 221 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 PLA2G4CQ9UP65 541 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 PCDHGA2Q9Y5H1 932 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CACNA1HO95180 2353 aa11.61□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CCDC163A0A0D9SF12 145 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 A0A0U1RQJ8 604 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 GOLGA6L3A6NEY3 463 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 TMEM110-MUSTN1A8MSY1 372 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 TTC34A8MYJ7 566 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 EEF2KO00418 725 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 AXIN1O15169 862 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ZMPSTE24O75844 475 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MT-CO1P00395 513 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SRPRAP08240 638 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 VAV1P15498 845 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 NDUFV2P19404 249 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MAN1A1P33908 653 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ACVRL1P37023 503 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MAPKAPK2P49137 400 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ARSEP51690 589 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CAMK2GQ13555 558 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 DPYSQ14117 519 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MESDQ14696 234 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SPA17Q15506 151 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 PPP6R3Q5H9R7 873 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SDE2Q6IQ49 451 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ZNF783Q6ZMS7 281 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 RFX8Q6ZV50 586 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 DCAF4L2Q8NA75 395 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 FRS2Q8WU20 508 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 TEKT4Q8WW24 435 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ATRIPQ8WXE1 791 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MRGPRX1Q96LB2 322 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ACE2Q9BYF1 805 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MKRN2Q9H000 416 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 KLC2Q9H0B6 622 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 IRF2BPLQ9H1B7 796 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 RETREG1Q9H6L5 497 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 PRSS16Q9NQE7 514 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ACTL7AQ9Y615 435 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 TNRC6BQ9UPQ9 1833 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 USP34Q70CQ2 3546 aa11.6□□□□□ -0.55
TNFRSF1A-208ENST00000536194 K7ERQ8 282 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 FGF10O15520 208 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CD160O95971 181 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CD48P09326 243 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 C7P10643 843 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 HTR7P34969 479 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 GJC1P36383 396 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ARHGAP25P42331 645 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 HADHBP55084 474 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 GSDMDP57764 484 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ARF5P84085 180 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SULT2A1Q06520 285 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MMRN1Q13201 1228 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 HNRNPA1L2Q32P51 320 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 BOLA3Q53S33 107 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 LINGO4Q6UY18 593 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 POLNQ7Z5Q5 900 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 NPWQ8N729 165 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 FRMD1Q8N878 549 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 KDM1BQ8NB78 822 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 FAM71BQ8TC56 605 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 RLN3Q8WXF3 142 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 TSC1Q92574 1164 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ARHGEF2Q92974 986 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 DESI2Q9BSY9 194 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 LACRTQ9GZZ8 138 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 GOLPH3Q9H4A6 298 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 PCDH18Q9HCL0 1135 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 KLHL11Q9NVR0 708 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 HS3ST2Q9Y278 367 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 INVSQ9Y283 1065 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MFHAS1Q9Y4C4 1052 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 HYOU1Q9Y4L1 999 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 DUSP10Q9Y6W6 482 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 THADAQ6YHU6 1953 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SPAG17Q6Q759 2223 aa11.59□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SHROOM3Q8TF72 1996 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 A0A0A6YYK5 440 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PROB1E7EW31 1015 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CBX4O00257 560 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DCLK1O15075 740 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SMAD6O43541 496 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ATP9BO43861 1147 aa11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SYNCRIPO60506 623 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 BUB1BO60566 1050 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RAMP2O60895 175 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms