RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 C1QBPQ07021 282 aaKnown RBP16.84■□□□□ 0.29
ATL3-202ENST00000535789 MTA1Q13330 715 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 SLC12A1Q13621 1099 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 FAM72AQ5TYM5 149 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 RNF219Q5W0B1 726 aaPredicted RBP16.84■□□□□ 0.29
ATL3-202ENST00000535789 FAM72DQ6L9T8 149 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 SLC23A3Q6PIS1 610 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 FAM72BQ86X60 149 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 MCOLN2Q8IZK6 566 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 FAM172AQ8WUF8 416 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 C1orf74Q96LT6 269 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 FAM129BQ96TA1 746 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 HAUS4Q9H6D7 363 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 C6orf106Q9H6K1 298 aaPredicted RBP16.84■□□□□ 0.29
ATL3-202ENST00000535789 NDFIP2Q9NV92 336 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 WDFY3Q8IZQ1 3526 aa16.84■□□□□ 0.29
ATL3-202ENST00000535789 KHNYNO15037 678 aaKnown RBP16.83■□□□□ 0.28
ATL3-202ENST00000535789 ZBTB24O43167 697 aaPredicted RBP16.83■□□□□ 0.28
ATL3-202ENST00000535789 MOCS3O95396 460 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 KRT3P12035 628 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 GPD1P21695 349 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 ZNF252P-AS1Q0IIN9 211 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 ASIC2Q16515 512 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 FILIP1LQ4L180 1135 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 HGSNATQ68CP4 663 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 ZNF776Q68DI1 518 aaPredicted RBP16.83■□□□□ 0.28
ATL3-202ENST00000535789 ACAD10Q6JQN1 1059 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 SND1Q7KZF4 910 aaKnown RBP eCLIP16.83■□□□□ 0.28
ATL3-202ENST00000535789 STRADAQ7RTN6 431 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 CCDC117Q8IWD4 279 aaPredicted RBP16.83■□□□□ 0.28
ATL3-202ENST00000535789 STK40Q8N2I9 435 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 AADATQ8N5Z0 425 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 C1orf216Q8TAB5 229 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 MCEEQ96PE7 176 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 HAPLN3Q96S86 360 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 SELENOOQ9BVL4 669 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 PABPC3Q9H361 631 aaKnown RBP16.83■□□□□ 0.28
ATL3-202ENST00000535789 FBRSQ9HAH7 460 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 AIPL1Q9NZN9 384 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 SUN2Q9UH99 717 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 VPS51Q9UID3 782 aa16.83■□□□□ 0.28
ATL3-202ENST00000535789 SHROOM3Q8TF72 1996 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.82■□□□□ 0.28
ATL3-202ENST00000535789 EDDM13A0A1B0GTR0 161 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 SIGLEC16A6NMB1 481 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 C4orf47A7E2U8 309 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 RNF103O00237 685 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 DDX3XO00571 662 aaKnown RBP eCLIP16.82■□□□□ 0.281e-12■■□□□ 13
ATL3-202ENST00000535789 MID1O15344 667 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 ATP9BO43861 1147 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 NDUFS2O75306 463 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 MT-CO1P00395 513 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 RHOCP08134 193 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 ACADMP11310 421 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 SKILP12757 684 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 ENGP17813 658 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 CDC25BP30305 580 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 ADRA1BP35368 520 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 HOXD12P35452 270 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
ATL3-202ENST00000535789 ST8SIA6P61647 398 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 NRG1Q02297 640 aaPredicted RBP16.82■□□□□ 0.28
ATL3-202ENST00000535789 ZNF177Q13360 481 aaPredicted RBP16.82■□□□□ 0.28
ATL3-202ENST00000535789 CST6Q15828 149 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 FIGNQ5HY92 759 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 DCAF12L1Q5VU92 463 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 DNAJC24Q6P3W2 148 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 NLRP14Q86W24 1093 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 MMAAQ8IVH4 418 aaKnown RBP16.82■□□□□ 0.28
ATL3-202ENST00000535789 PYROXD2Q8N2H3 581 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 OR7D4Q8NG98 312 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 OR2I1PQ8NGU4 316 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 DNASE2BQ8WZ79 361 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 ORAI3Q9BRQ5 295 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 VPS28Q9UK41 221 aa16.82■□□□□ 0.28
ATL3-202ENST00000535789 TARSL2A2RTX5 802 aaKnown RBP16.81■□□□□ 0.28
ATL3-202ENST00000535789 METTL12A8MUP2 240 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 TMCO5BA8MYB1 307 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 K7ERQ8 282 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 SRGAP2O75044 1071 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 SRCP12931 536 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 SDHBP21912 280 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 OXTRP30559 389 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 DRD3P35462 400 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 PSMD8P48556 350 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 BNC1Q01954 994 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 ZBTB16Q05516 673 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 Q6ZVU0 165 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 SH2D3CQ8N5H7 860 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 NTAN1Q96AB6 310 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 PDLIM2Q96JY6 352 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 NUP58Q9BVL2 599 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 TRIM7Q9C029 511 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 MUC3BQ9H195 1237 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 SARDHQ9UL12 918 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 ACTL7AQ9Y615 435 aa16.81■□□□□ 0.28
ATL3-202ENST00000535789 FRYQ5TBA9 3013 aa16.8■□□□□ 0.28
ATL3-202ENST00000535789 CABIN1Q9Y6J0 2220 aa16.8■□□□□ 0.28
ATL3-202ENST00000535789 A0A1W2PP55 124 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms