RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TBC1D3BA6NDS4 549 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TBC1D3FA6NER0 549 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TBC1D3LB9A6J9 549 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 POC1B-GALNT4F8VUJ3 575 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 PSMD14O00487 310 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ACKR2O00590 384 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ASNA1O43681 348 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 HTATSF1O43719 755 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 USP1O94782 785 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TFRCP02786 760 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ALDOAP04075 364 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 RHOP08100 348 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 CD63P08962 238 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TBC1D3HP0C7X1 549 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TMIGD3P0DMS9 266 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 DRD1P21728 446 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ZFP36P26651 326 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 CST5P28325 142 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 PDIA3P30101 505 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ADRA1BP35368 520 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 IGHMBP2P38935 993 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 CLCN2P51788 898 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 JAK3P52333 1124 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 OAZ1P54368 228 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 UBXN2AP68543 259 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 E2F1Q01094 437 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 DNASE1L3Q13609 305 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ANKRD1Q15327 319 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 MTHFSDQ2M296 383 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TMEM95Q3KNT9 176 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TRIM60Q495X7 471 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TBC1D3GQ6DHY5 549 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TBC1D3CQ6IPX1 549 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ANO7Q6IWH7 933 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ERAP2Q6P179 960 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TMEM65Q6PI78 240 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 OLFM4Q6UX06 510 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TBC1D3Q8IZP1 549 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 GALNT4Q8N4A0 578 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 DEFB123Q8N688 67 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TERB1Q8NA31 727 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 OTUD7AQ8TE49 926 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 HMGB4Q8WW32 186 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 THAP4Q8WY91 577 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 LARP4BQ92615 738 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 C3orf49Q96BT1 292 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ZNF333Q96JL9 665 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 SENP7Q9BQF6 1050 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 UTP14AQ9BVJ6 771 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ELAC1Q9H777 363 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 USP29Q9HBJ7 922 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 PTPRHQ9HD43 1115 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ERVK-5Q9HDB9 667 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 GJB4Q9NTQ9 266 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 DLL3Q9NYJ7 618 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 PI4KBQ9UBF8 816 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 TBC1D30Q9Y2I9 924 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 ZNF646O15015 1829 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 MAP3K15Q6ZN16 1313 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 MYO3BQ8WXR4 1341 aa3.67□□□□□ -1.82
SNHG1-202ENST00000535689 DDX60Q8IY21 1712 aaKnown RBP3.67□□□□□ -1.82
SNHG1-202ENST00000535689 SZT2Q5T011 3432 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 GRID2IPA4D2P6 1211 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TMEM247A6NEH6 219 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 MBD3L5A6NJ08 208 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TMEM232C9JQI7 657 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 H0YIZ8 118 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 H3BNC9 293 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 ZNF213O14771 459 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TSPAN3O60637 253 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 NBNO60934 754 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 PPFIA2O75334 1257 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 MT-CO3P00414 261 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 C1RP00736 705 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 ARP10275 920 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 XBP1P17861 261 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 DRD4P21917 467 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 AKT1P31749 480 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 GRK5P34947 590 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 ACVRL1P37023 503 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 KCNJ4P48050 445 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TLE3Q04726 772 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 FOXD4Q12950 439 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 GRAPQ13588 217 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TAF7Q15545 349 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 CNGA3Q16281 694 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 LY6KQ17RY6 165 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 FAM110CQ1W6H9 321 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TMEM196Q5HYL7 178 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TSTD2Q5T7W7 516 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 FAM109BQ6ICB4 259 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 ACSM6Q6P461 480 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 APOBEC3FQ8IUX4 373 aaKnown RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TMEM57Q8N5G2 664 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 C11orf44Q8N8P7 122 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 FSIP1Q8NA03 581 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 IL17REQ8NFR9 667 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 GRAPLQ8TC17 118 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 SPPL3Q8TCT6 385 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 FAM122AQ96E09 287 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms