RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SIK3Q9Y2K2 1263 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 CAPN1P07384 714 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 ZNF24P17028 368 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 EIF4BP23588 611 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 CREMQ03060 361 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 GRIN3AQ8TCU5 1115 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 RSPH9Q9H1X1 276 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 MRASO14807 208 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 FGF10O15520 208 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 SCTRP47872 440 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 MARSP56192 900 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 CDC42BPAQ5VT25 1732 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 CDKAL1Q5VV42 579 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 IL27RAQ6UWB1 636 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 TMEM199Q8N511 208 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 MSCO60682 206 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 ZCCHC18P0CG32 403 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 BIKQ13323 160 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 IFNLR1Q8IU57 520 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 FAM20CQ8IXL6 584 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 SVOPQ8N4V2 548 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 MTFMTQ96DP5 389 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 APOL4Q9BPW4 351 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 POLR1AO95602 1720 aaPredicted RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 CLTCQ00610 1675 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 HMGB3O15347 200 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 COX7A2P14406 83 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 PTPN1P18031 435 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 RSBN1Q5VWQ0 802 aaPredicted RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 MAP4K3Q8IVH8 894 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 SEMA4AQ9H3S1 761 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 NRXN1Q9ULB1 1477 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 CEP152O94986 1710 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 CENPXA8MT69 81 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 ADCY6O43306 1168 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 ETS1P14921 441 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 TLX1P31314 330 aaPredicted RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 IL2P60568 153 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 SNRPD1P62314 119 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 TSNQ15631 228 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 OTUD3Q5T2D3 398 aaPredicted RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 KIAA1324Q6UXG2 1013 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 S100A13Q99584 98 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 AK9Q5TCS8 1911 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 MYL12AP19105 171 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 TMEM119Q4V9L6 283 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 CDC73Q6P1J9 531 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 MARK2Q7KZI7 788 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 TCP10LQ8TDR4 215 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 PECAM1P16284 738 aaPredicted RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 GSSP48637 474 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 TRMT5Q32P41 509 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 HECTD3Q5T447 861 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 ASAH2Q9NR71 780 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 IL17RBQ9NRM6 502 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 DNMT3LQ9UJW3 386 aa18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.46■□□□□ 0.55
SFSWAP-203ENST00000535236 COPZ1P61923 177 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 IZUMO2Q6UXV1 221 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 RNASE11Q8TAA1 199 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 HIC2Q96JB3 615 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 AGRPO00253 132 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 LDLRP01130 860 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 IFNA16P05015 189 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 PIK3R1P27986 724 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 ELMO1Q92556 727 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 WNT8BQ93098 351 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 PRDM16Q9HAZ2 1276 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 TNPO3Q9Y5L0 923 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 NRCAMQ92823 1304 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 TRIM32Q13049 653 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 RMND5BQ96G75 393 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 PNMA5Q96PV4 448 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 CPS1P31327 1500 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 EPN2O95208 641 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 SSTR1P30872 391 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 NOS2P35228 1153 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 TRIM25Q14258 630 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 ZNHIT3Q15649 155 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 ZNF618Q5T7W0 954 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 AGMOQ6ZNB7 445 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 RNF145Q96MT1 663 aa18.45■□□□□ 0.54
SFSWAP-203ENST00000535236 ACSL4O60488 711 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CDK7P50613 346 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 PARP6Q2NL67 630 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 SETD9Q8NE22 299 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 SIKE1Q9BRV8 207 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 RXFP1Q9HBX9 757 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 MEI4A8MW99 385 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 C1QTNF3-AMACRE9PGA6 284 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CTNNB1P35222 781 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CORO7P57737 925 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 UBE2E3Q969T4 207 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 RIBC2Q9H4K1 309 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 APOC4-APOC2K7ER74 178 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 MYL12BO14950 172 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 CLPTM1O96005 669 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 APOC2P02655 101 aa18.44■□□□□ 0.54
SFSWAP-203ENST00000535236 ANXA6P08133 673 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms