RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RAVER1Q8IY67 606 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 FAM156AQ8NDB6 213 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 N4BP2L2Q92802 583 aaPredicted RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 TTC17Q96AE7 1141 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 CTHRC1Q96CG8 243 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 NAF1Q96HR8 494 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 CCDC114Q96M63 670 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ALS2CR12Q96Q35 445 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 SH2D3AQ9BRG2 576 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 UNKQ9C0B0 810 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 NUP62CLQ9H1M0 184 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 VPS16Q9H269 839 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 CHST8Q9H2A9 424 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 MMADHCQ9H3L0 296 aaPredicted RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 TSPY26PQ9H489 355 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ZNHIT6Q9NWK9 470 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ASIC5Q9NY37 505 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 C6orf203Q9P0P8 240 aaPredicted RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 COL20A1Q9P218 1284 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 DNAJB11Q9UBS4 358 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 DDX25Q9UHL0 483 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 LCMT1Q9UIC8 334 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 CAPN11Q9UMQ6 739 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 SCAF8Q9UPN6 1271 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ITM2BQ9Y287 266 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 GMEB1Q9Y692 573 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 NRAPQ86VF7 1730 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ARHGEF28Q8N1W1 1705 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 PLCH1Q4KWH8 1693 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 TOPAZ1Q8N9V7 1692 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 SLIT2O94813 1529 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 TULP4Q9NRJ4 1543 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ATP7BP35670 1465 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 BCL9LQ86UU0 1499 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 TNS3Q68CZ2 1445 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 FRMPD2Q68DX3 1309 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 CCDC171Q6TFL3 1326 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 TRIM64CA6NLI5 447 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 PROB1E7EW31 1015 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 SPRY2O43597 315 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 NEMFO60524 1076 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 PARP1P09874 1014 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 APEHP13798 732 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 EZRP15311 586 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 H2AFXP16104 143 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 FERP16591 822 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 DESP17661 470 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ITGB6P18564 788 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 CYP11B2P19099 503 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 MCM3P25205 808 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 RBL1P28749 1068 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ARHGAP25P42331 645 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 CCNHP51946 323 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 COPB1P53618 953 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 TUBB4BP68371 445 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 CFHR3Q02985 330 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 DHX8Q14562 1220 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 KCNB1Q14721 858 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 TWIST1Q15672 202 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ZSCAN23Q3MJ62 389 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 CCDC122Q5T0U0 273 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ANKRD45Q5TZF3 282 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 FAAH2Q6GMR7 532 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 SLC2A7Q6PXP3 512 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 TMCO3Q6UWJ1 677 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 DCDC5Q6ZRR9 648 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ARMC9Q7Z3E5 817 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 IQCA1Q86XH1 822 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 COL23A1Q86Y22 540 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 DZIP1Q86YF9 867 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 CCAR1Q8IX12 1150 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 C16orf71Q8IYS4 520 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 PNPLA1Q8N8W4 532 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 C1orf131Q8NDD1 294 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 B4GALNT2Q8NHY0 566 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 OSR1Q8TAX0 266 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ARHGAP45Q92619 1136 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ZBTB10Q96DT7 871 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 HIC2Q96JB3 615 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 VCX3BQ9H321 246 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 RPAP3Q9H6T3 665 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 PDGFCQ9NRA1 345 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 COMMD8Q9NX08 183 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 RABL2AQ9UBK7 228 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 DKK4Q9UBT3 224 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ZNF212Q9UDV6 495 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ZMAT5Q9UDW3 170 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 PCSK1NQ9UHG2 260 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 MID2Q9UJV3 735 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 TMED5Q9Y3A6 229 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 VIRMAQ69YN4 1812 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 MARF1Q9Y4F3 1742 aaKnown RBP4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ALS2Q96Q42 1657 aa4.57□□□□□ -1.68
ITGB1-219ENST00000534049 ANKARQ7Z5J8 1434 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 GOLGA6L10A0A0M3HER8 536 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 CCDC194A0A1B0GVG4 234 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 TARSL2A2RTX5 802 aaKnown RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 GOLGA6L4A6NEF3 574 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms