RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 CCDC6Q16204 474 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 SARM1Q6SZW1 724 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 KIAA0907Q7Z7F0 614 aaPredicted RBP11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 C11orf74Q86VG3 221 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 TMPRSS6Q8IU80 811 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 DEFB119Q8N690 84 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 FRMD1Q8N878 549 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 CENPIQ92674 756 aaPredicted RBP11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 TTC17Q96AE7 1141 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 SIPA1Q96FS4 1042 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 MRGPRX1Q96LB2 322 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 DNAJC7Q99615 494 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 EPAS1Q99814 870 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 FEM1AQ9BSK4 669 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 TRIM7Q9C029 511 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 THAP2Q9H0W7 228 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 ABHD10Q9NUJ1 306 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 GPATCH2LQ9NWQ4 482 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 SUN2Q9UH99 717 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
UBASH3B-208ENST00000533451 VPS13AQ96RL7 3174 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 TMEM191CA6NGB0 347 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 AKR1B15C9JRZ8 316 aaPredicted RBP11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 FAM72CH0Y354 149 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 CBX4O00257 560 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 RNASEH1O60930 286 aaKnown RBP11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 LRIG2O94898 1065 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 SRPRAP08240 638 aaKnown RBP11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 EPHB2P29323 1055 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 GJC1P36383 396 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 P2RY2P41231 377 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 KRT83P78385 493 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 PLK5Q496M5 336 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 FAM72AQ5TYM5 149 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 IL31Q6EBC2 164 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 FAM72DQ6L9T8 149 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 LPCAT2Q7L5N7 544 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 CYP2U1Q7Z449 544 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 BNIPLQ7Z465 357 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 FAM72BQ86X60 149 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 TMEFF1Q8IYR6 380 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 PYROXD2Q8N2H3 581 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 OR52K2Q8NGK3 314 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 OR2T3Q8NH03 318 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 CTNNBL1Q8WYA6 563 aaPredicted RBP11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 NTAN1Q96AB6 310 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 LMLNQ96KR4 655 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 CCDC42Q96M95 316 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 C2orf49Q9BVC5 232 aaPredicted RBP11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 MAGEB5Q9BZ81 275 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 MKRN2Q9H000 416 aaKnown RBP11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 ISCUQ9H1K1 167 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 ARRDC1-AS1Q9H2J1 176 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 TMEM245Q9H330 911 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 DHX35Q9H5Z1 703 aaKnown RBP11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 ATP13A1Q9HD20 1204 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 PRSS16Q9NQE7 514 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 CTTNBP2NLQ9P2B4 639 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 DNAI1Q9UI46 699 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 SLCO3A1Q9UIG8 710 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 PLXND1Q9Y4D7 1925 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 NUP205Q92621 2012 aa11.77□□□□□ -0.53
UBASH3B-208ENST00000533451 A0A0D9SEW6 157 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 EDDM13A0A1B0GTR0 161 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 DRGXA6NNA5 263 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 TMEM110-MUSTN1A8MSY1 372 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 DAPK3O43293 454 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 AP5Z1O43299 807 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 SNAP91O60641 907 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 SIN3BO75182 1162 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 DNTTP04053 509 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 RETP07949 1114 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 PSMD8P48556 350 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 ZNF75DP51815 510 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 GALCP54803 685 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 TPI1P60174 286 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 SCAPQ12770 1279 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 CAMK2GQ13555 558 aaPredicted RBP11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 ENPP2Q13822 863 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 HNRNPA1L2Q32P51 320 aaKnown RBP11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 TTC31Q49AM3 519 aaPredicted RBP11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 C5orf22Q49AR2 442 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 PPP6R3Q5H9R7 873 aaPredicted RBP11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 ZNF776Q68DI1 518 aaPredicted RBP11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 LINGO4Q6UY18 593 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 SETD3Q86TU7 594 aaPredicted RBP11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 ZNF683Q8IZ20 524 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 ATP11CQ8NB49 1132 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 OR7D4Q8NG98 312 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 MRGPRX3Q96LB0 322 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 OSBPL2Q9H1P3 480 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 DUSP15Q9H1R2 295 aaPredicted RBP11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 ZWILCHQ9H900 591 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 CD93Q9NPY3 652 aa11.76□□□□□ -0.53
UBASH3B-208ENST00000533451 SPTLC3Q9NUV7 552 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms