RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FBXO44Q9H4M3 255 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 FBRSQ9HAH7 460 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 DMAP1Q9NPF5 467 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 GDF3Q9NR23 364 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 CISHQ9NSE2 258 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 CNTN6Q9UQ52 1028 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZNF510Q9Y2H8 683 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 ADGRG1Q9Y653 693 aa11.74□□□□□ -0.53
TRAPPC4-213ENST00000533149 A0A1W2PPC4 97 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 MT-CO3P00414 261 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 CALCAP01258 141 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 DNTTP04053 509 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 TNFAIP3P21580 790 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 ACP1P24666 158 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 EPHA8P29322 1005 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 CHKAP35790 457 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 PLA2G4AP47712 749 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 KIF11P52732 1056 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 TNNC1P63316 161 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 NFATC3Q12968 1075 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 SHBQ15464 509 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 TTC31Q49AM3 519 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 KIAA0895LQ68EN5 471 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 TMEM270Q6UE05 265 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 ATG14Q6ZNE5 492 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 RBBP8NLQ8NC74 664 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 ACRBPQ8NEB7 543 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 PIWIL1Q96J94 861 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 AGPAT1Q99943 283 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 CIPCQ9C0C6 399 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 SMYD3Q9H7B4 428 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 ACP6Q9NPH0 428 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 CYLDQ9NQC7 956 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 SPTLC3Q9NUV7 552 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 TRMT1Q9NXH9 659 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 PPP2R2CQ9Y2T4 447 aa11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 REXO2Q9Y3B8 237 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-213ENST00000533149 MGAQ8IWI9 3026 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 A8MXQ7 604 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 K7ENP7 123 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 DDX3XO00571 662 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 TERTO14746 1132 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 TBX18O95935 607 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 MPOP05164 745 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 CYP11B1P15538 503 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 CHRNB2P17787 502 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 LSSP48449 732 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 GABREP78334 506 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 SPA17Q15506 151 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 FYB2Q5VWT5 728 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 INO80CQ6PI98 192 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 KLHDC10Q6PID8 442 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 XKR5Q6UX68 686 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 Q6ZNB5 142 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 NOP9Q86U38 636 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 SLC47A2Q86VL8 602 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 CCAR2Q8N163 923 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 OXR1Q8N573 874 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 SLC20A1Q8WUM9 679 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 GOLGA1Q92805 767 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 SMARCD1Q96GM5 515 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 SLC6A18Q96N87 628 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 SYT11Q9BT88 431 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 MED10Q9BTT4 135 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 SLC2A11Q9BYW1 496 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 DPEP3Q9H4B8 488 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 THSD1Q9NS62 852 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 KCND1Q9NSA2 647 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 ANKMY1Q9P2S6 941 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 NOCTQ9UK39 431 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 NCKAP1Q9Y2A7 1128 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 NME7Q9Y5B8 376 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 ATMQ13315 3056 aa11.72□□□□□ -0.53
TRAPPC4-213ENST00000533149 CKAP5Q14008 2032 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 A0A087X0T9 212 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 USP27XA6NNY8 438 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZSCAN12O43309 604 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 LCA5LO95447 670 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 CYBBP04839 570 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 IGHV4-34P06331 123 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 CCDC175P0C221 793 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 FAM228BP0C875 321 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 GP1BBP13224 206 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 CD38P28907 300 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 MAGEA1P43355 309 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 RPS14P62263 151 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 KRT83P78385 493 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 SFSWAPQ12872 951 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 SLC45A4Q5BKX6 768 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 C6orf132Q5T0Z8 1188 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 TAF3Q5VWG9 929 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 VPS36Q86VN1 386 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 REXO1L1PQ8IX06 675 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 TTC39CQ8N584 583 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms