RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SETMARQ53H47 684 aaPredicted RBP13.43□□□□□ -0.26
COPB1-209ENST00000533096 ANKRD40Q6AI12 368 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 FOXR1Q6PIV2 292 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 TAC4Q86UU9 113 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 CCAR2Q8N163 923 aaKnown RBP13.43□□□□□ -0.26
COPB1-209ENST00000533096 RFFLQ8WZ73 363 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 SLC39A13Q96H72 371 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 HSFY1Q96LI6 401 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 SPAG5Q96R06 1193 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 TSG101Q99816 390 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.43□□□□□ -0.26
COPB1-209ENST00000533096 SEMA4CQ9C0C4 833 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 FZD3Q9NPG1 666 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 ARMCX3Q9UH62 379 aaPredicted RBP13.43□□□□□ -0.26
COPB1-209ENST00000533096 DMTF1Q9Y222 760 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 COQ4Q9Y3A0 265 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 NUMA1Q14980 2115 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 A0A1W2PQU0 124 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 CAPN8A6NHC0 703 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 F5H5T6 163 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 ERVH48-1M5A8F1 160 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 PLRG1O43660 514 aaKnown RBP13.42□□□□□ -0.26
COPB1-209ENST00000533096 CSO75390 466 aaKnown RBP13.42□□□□□ -0.26
COPB1-209ENST00000533096 TBXAS1P24557 533 aaPredicted RBP13.42□□□□□ -0.26
COPB1-209ENST00000533096 PCBP4P57723 403 aaKnown RBP13.42□□□□□ -0.26
COPB1-209ENST00000533096 TMPRSS3P57727 454 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 CLDN2P57739 230 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 KCNMA1Q12791 1236 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 OVGP1Q12889 678 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 IQCHQ86VS3 1027 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 CACTIN-AS1Q8N1I8 211 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 FAM181AQ8N9Y4 354 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 KCNE4Q8WWG9 221 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 ZNF578Q96N58 590 aaPredicted RBP13.42□□□□□ -0.26
COPB1-209ENST00000533096 NT5C1BQ96P26 610 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 KDM4CQ9H3R0 1056 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 KLHL11Q9NVR0 708 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 PPM1HQ9ULR3 514 aa13.42□□□□□ -0.26
COPB1-209ENST00000533096 TPX2Q9ULW0 747 aaKnown RBP13.42□□□□□ -0.26
COPB1-209ENST00000533096 ITIH6Q6UXX5 1313 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 KNL1Q8NG31 2342 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 A0A1B0GVM2 712 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 CPED1A4D0V7 1026 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 C1QTNF3-AMACRE9PGA6 284 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 NEBLO76041 1014 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 ZNF202O95125 648 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 PCDH8O95206 1070 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 TRUB2O95900 331 aaKnown RBP13.41□□□□□ -0.26
COPB1-209ENST00000533096 MCCD1P59942 119 aaPredicted RBP13.41□□□□□ -0.26
COPB1-209ENST00000533096 FKBP3Q00688 224 aaKnown RBP13.41□□□□□ -0.26
COPB1-209ENST00000533096 RHDQ02161 417 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 SULT2A1Q06520 285 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 DENND1BQ6P3S1 775 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 Q6ZVU0 165 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 HSCBQ8IWL3 235 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 LSMEM2Q8N112 164 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 UBR7Q8N806 425 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 ATP6V0D2Q8N8Y2 350 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 OR4C6Q8NH72 309 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 FRS2Q8WU20 508 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 BTN2A3PQ96KV6 586 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 APOLD1Q96LR9 279 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 NOX5Q96PH1 765 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 DEPDC7Q96QD5 511 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.41□□□□□ -0.26
COPB1-209ENST00000533096 DNAJC28Q9NX36 388 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 SLC25A13Q9UJS0 675 aa13.41□□□□□ -0.26
COPB1-209ENST00000533096 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 KCNU1A8MYU2 1149 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 C10orf142B7Z368 130 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 B8ZZF3 427 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 KPNA3O00505 521 aaPredicted RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 MCF2LO15068 1137 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 SLC7A4O43246 635 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 ALPPL2P10696 532 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 KRT5P13647 590 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 RBMS1P29558 406 aaKnown RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 AKT2P31751 481 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 NUDT1P36639 197 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 LSSP48449 732 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 PMS1P54277 932 aaKnown RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 PITX1P78337 314 aaPredicted RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 KCNC4Q03721 635 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 ZNF177Q13360 481 aaPredicted RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 PNOCQ13519 176 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 SLC12A1Q13621 1099 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 TAF5Q15542 800 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 AGBL4Q5VU57 503 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 ISM2Q6H9L7 571 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 CRTC1Q6UUV9 634 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 TRIM69Q86WT6 500 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 OR13H1Q8NG92 308 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 MAPK15Q8TD08 544 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 VCPIP1Q96JH7 1222 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 RPRD1AQ96P16 312 aaPredicted RBP13.4□□□□□ -0.26
COPB1-209ENST00000533096 FEM1AQ9BSK4 669 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 GOLPH3LQ9H4A5 285 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 FAM204AQ9H8W3 233 aa13.4□□□□□ -0.26
COPB1-209ENST00000533096 POLR1BQ9H9Y6 1135 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms