RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 NME3Q13232 169 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 CAMK2BQ13554 666 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 SMAD1Q15797 465 aaKnown RBP17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 COL28A1Q2UY09 1125 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 POM121L1PQ3SYA9 428 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 TTC39BQ5VTQ0 682 aaPredicted RBP17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 OLFML1Q6UWY5 402 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 GBP6Q6ZN66 633 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 SPAG5Q96R06 1193 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 ASNSD1Q9NWL6 643 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 RWDD2AQ9UIY3 292 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 VANGL2Q9ULK5 521 aa17.59■□□□□ 0.41
RPUSD4-207ENST00000532800 TBC1D3DA0A087WVF3 549 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3IA0A087WXS9 549 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3EA0A087X179 549 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3KA0A087X1G2 549 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3FA6NER0 549 aaPredicted RBP17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TRABD2BA6NFA1 517 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3LB9A6J9 549 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 LATO43561 262 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 RTN2O75298 545 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3HP0C7X1 549 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 SLC2A3P11169 496 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 SULT2A1Q06520 285 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 CYP4F3Q08477 520 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 DNAJC3Q13217 504 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 AUHQ13825 339 aaKnown RBP17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 EXOC3L4Q17RC7 722 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 EFHC1Q5JVL4 640 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 OTUD1Q5VV17 481 aaPredicted RBP17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3GQ6DHY5 549 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 OR6B2Q6IFH4 312 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3CQ6IPX1 549 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 C14orf80Q86SX3 495 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 IRF2BP1Q8IU81 584 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 TBC1D3Q8IZP1 549 aaPredicted RBP17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 SAP25Q8TEE9 199 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 FAM131CQ96AQ9 280 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 SKA1Q96BD8 255 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 SIX2Q9NPC8 291 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 PLCB1Q9NQ66 1216 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 GDF3Q9NR23 364 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 PCDHGC3Q9UN70 934 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 HS3ST4Q9Y661 456 aa17.58■□□□□ 0.4
RPUSD4-207ENST00000532800 ENC1O14682 589 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 DAB1O75553 588 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 ITGAVP06756 1048 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 PON1P27169 355 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 EPHA8P29322 1005 aaPredicted RBP17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 MAT2AP31153 395 aaKnown RBP17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 NXPH1P58417 271 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 CAMK4Q16566 473 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 ACCSLQ4AC99 568 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 PTPN20Q4JDL3 420 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 C11orf57Q6ZUT1 292 aaPredicted RBP17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 Q6ZVU0 165 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 HNRNPLLQ8WVV9 542 aaKnown RBP17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 CNDP2Q96KP4 475 aaKnown RBP17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 FAM81BQ96LP2 452 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 FEM1AQ9BSK4 669 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 ANLNQ9NQW6 1124 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 ARHGAP20Q9P2F6 1191 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 DKK4Q9UBT3 224 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 SLC25A13Q9UJS0 675 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 OR51B4Q9Y5P0 310 aa17.57■□□□□ 0.4
RPUSD4-207ENST00000532800 FAM170AA1A519 330 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 TLR4O00206 839 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 PLRG1O43660 514 aaKnown RBP17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 ATP9BO43861 1147 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 PAGE1O75459 146 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 LDOC1O95751 146 aaPredicted RBP17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 TFE3P19532 575 aaPredicted RBP17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 OXCT1P55809 520 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 CNTN1Q12860 1018 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 BNIP3Q12983 259 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 DLG2Q15700 870 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 AGBL4Q5VU57 503 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 NAPEPLDQ6IQ20 393 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 PDZD3Q86UT5 571 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 SLC47A2Q86VL8 602 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 SPATS2Q86XZ4 545 aaKnown RBP17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 EID2Q8N6I1 236 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 OR8D1Q8WZ84 308 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 VPS28Q9UK41 221 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 SNX10Q9Y5X0 201 aa17.56■□□□□ 0.4
RPUSD4-207ENST00000532800 URB1O60287 2271 aaKnown RBP17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 GTPBP10A4D1E9 387 aaKnown RBP17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 I6L893 689 aaPredicted RBP17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 M0QYT0 321 aa17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 BNIP3LO60238 219 aa17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 CNTN5O94779 1100 aa17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 CLCN1P35523 988 aa17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 VASPP50552 380 aaPredicted RBP17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 SLC6A3Q01959 620 aa17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 PTK2Q05397 1052 aa17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 ZNF177Q13360 481 aaPredicted RBP17.55■□□□□ 0.4
RPUSD4-207ENST00000532800 SLC26A9Q7LBE3 791 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms