RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TRIM60Q495X7 471 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ZFP69Q49AA0 526 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ZBED5Q49AG3 693 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 KYAT3Q6YP21 454 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CCDC81Q6ZN84 652 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 DCDC5Q6ZRR9 648 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TMCO2Q7Z6W1 182 aaPredicted RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CTU1Q7Z7A3 348 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SDR16C5Q8N3Y7 309 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MARVELD2Q8N4S9 558 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 KCTD17Q8N5Z5 321 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ALG3Q92685 438 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 LPPQ93052 612 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 IFT43Q96FT9 208 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 FGFBP2Q9BYJ0 223 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SEMA6AQ9H2E6 1030 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 APEX2Q9UBZ4 518 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ZNF221Q9UK13 617 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 RWDD3Q9Y3V2 267 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SSC5DA1L4H1 1573 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 A0A1W2PQ72 361 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 C2orf71A6NGG8 1288 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PDXKO00764 312 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ATMINO43313 823 aaPredicted RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MUTP22033 750 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SERPINB5P36952 375 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SERPINH1P50454 418 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TLE2Q04725 743 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MRPL28Q13084 256 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MTM1Q13496 603 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 UBAP2LQ14157 1087 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MPP2Q14168 576 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PGS1Q32NB8 556 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TIGD2Q4W5G0 525 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 IER5Q5VY09 327 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TTC23LQ6PF05 361 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 HPS6Q86YV9 775 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MMAAQ8IVH4 418 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ZCCHC9Q8N567 271 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 BHLHE22Q8NFJ8 381 aaPredicted RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 HTRA1Q92743 480 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 AZIN2Q96A70 460 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 C12orf43Q96C57 262 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PPP1R10Q96QC0 940 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PI4K2AQ9BTU6 479 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 IARS2Q9NSE4 1012 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 BLOC1S4Q9NUP1 217 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CACNG4Q9UBN1 327 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CDH22Q9UJ99 828 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PACSIN3Q9UKS6 424 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 GRID1Q9ULK0 1009 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 KNL1Q8NG31 2342 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SYNJ2BP-COX16A0A087WUM0 186 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 A0A1W2PPM1 405 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 FAM155AB1AL88 458 aaPredicted RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PIK3R2O00459 728 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TBX3O15119 743 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 EPN2O95208 641 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MMP3P08254 477 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SPATA31C1P0DKV0 1188 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ITIH1P19827 911 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 GRK2P25098 689 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CD52P31358 61 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TM4SF4P48230 202 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 IL1RL1Q01638 556 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 LAMTOR4Q0VGL1 99 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 BST1Q10588 318 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ORC2Q13416 577 aaPredicted RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SNX17Q15036 470 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 LDLRAP1Q5SW96 308 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 DARS2Q6PI48 645 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PRUNE1Q86TP1 453 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 RFX6Q8HWS3 928 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ALDH16A1Q8IZ83 802 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 KIAA0319LQ8IZA0 1049 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SEC14L1Q92503 715 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 USP13Q92995 863 aaPredicted RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 FAF2Q96CS3 445 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TUBGCP3Q96CW5 907 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PWWP2AQ96N64 755 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 GBA3Q9H227 469 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 LRRC19Q9H756 370 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PLEKHA5Q9HAU0 1116 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TUFT1Q9NNX1 390 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 C1orf112Q9NSG2 853 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 THAP1Q9NVV9 213 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 GDAP2Q9NXN4 497 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 COX16Q9P0S2 106 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SPO11Q9Y5K1 396 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TTC34A8MYJ7 566 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 NT5C1B-RDH14C9J2C7 533 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TNFRSF10AO00220 468 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 DCXO43602 365 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PLA2G6O60733 806 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 TCEA3O75764 348 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 EN2P19622 333 aaPredicted RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 ACAT1P24752 427 aaKnown RBP6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 PTGIRP43119 386 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 NME3Q13232 169 aa6.91□□□□□ -1.3
TGFBR3-209ENST00000532540 LRP8Q14114 963 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms