RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SARDHQ9UL12 918 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 TLR4O00206 839 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 RFPL3O75679 317 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 NNMTP40261 264 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 MARSP56192 900 aaKnown RBP18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 SLC12A1Q13621 1099 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 MORC3Q14149 939 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 SPATS2Q86XZ4 545 aaKnown RBP18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 DEFB106AQ8N104 65 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 OR52K2Q8NGK3 314 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 SPAG5Q96R06 1193 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 MED15Q96RN5 788 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 CRACR2AQ9BSW2 395 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 DDIT4Q9NX09 232 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 ARHGAP20Q9P2F6 1191 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 PCDHGA1Q9Y5H4 931 aa18.98■□□□□ 0.63
SSSCA1-206ENST00000531405 TRPM6Q9BX84 2022 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 A0A1B0GVM2 712 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 TCAF2A6NFQ2 919 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 LATO43561 262 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 GRAP2O75791 330 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 GNA14O95837 355 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 JUPP14923 745 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 GGCXP38435 758 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 ARRB1P49407 418 aaPredicted RBP18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 ACADVLP49748 655 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 APBA1Q02410 837 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 PAK1Q13153 545 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 MEA1Q16626 185 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 ACCSLQ4AC99 568 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 RABGAP1LQ5R372 815 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 NAPEPLDQ6IQ20 393 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 FBXL22Q6P050 247 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 FOXR2Q6PJQ5 311 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 PASD1Q8IV76 773 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 RNF34Q969K3 372 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 CPXM1Q96SM3 734 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 SLC12A6Q9UHW9 1150 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 PTPRQQ9UMZ3 2332 aa18.97■□□□□ 0.63
SSSCA1-206ENST00000531405 A0A087WV48 116 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 BECN2A8MW95 431 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 YKT6O15498 198 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 USP8P40818 1118 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 PLK1P53350 603 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 CDK17Q00537 523 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 SULT2A1Q06520 285 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 CNTN1Q12860 1018 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 ARHGAP44Q17R89 818 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 SLC45A4Q5BKX6 768 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 TTC39BQ5VTQ0 682 aaPredicted RBP18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 ELOA2Q8IYF1 753 aaPredicted RBP18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 WDTC1Q8N5D0 677 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 OR8D1Q8WZ84 308 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 FAM131CQ96AQ9 280 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 ALG14Q96F25 216 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 RPRD1AQ96P16 312 aaPredicted RBP18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 SLC2A13Q96QE2 648 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 VANGL2Q9ULK5 521 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 CA5BQ9Y2D0 317 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 MGAQ8IWI9 3026 aa18.96■□□□□ 0.63
SSSCA1-206ENST00000531405 PLRG1O43660 514 aaKnown RBP18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 BNIP3LO60238 219 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 SLC9A1P19634 815 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 CCR1P32246 355 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 HNF1BP35680 557 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 TARDBPQ13148 414 aaKnown RBP eCLIP18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 NME3Q13232 169 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 AUHQ13825 339 aaKnown RBP18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 HES3Q5TGS1 186 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 AGBL4Q5VU57 503 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 SFMBT2Q5VUG0 894 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 TRIM65Q6PJ69 517 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 FAM183BPQ6ZVS7 135 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 Q6ZVU0 165 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 KANSL1Q7Z3B3 1105 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 PRPF39Q86UA1 669 aaKnown RBP18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 MFSD2AQ8NA29 543 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 PIP4K2CQ8TBX8 421 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 TSC1Q92574 1164 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 NXPE2Q96DL1 559 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 FEM1AQ9BSK4 669 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 ERVMER34-1Q9H9K5 563 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 SLC25A13Q9UJS0 675 aa18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 HELZ2Q9BYK8 2649 aaKnown RBP18.95■□□□□ 0.62
SSSCA1-206ENST00000531405 ATMQ13315 3056 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 E9PAM4 449 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 ATP9BO43861 1147 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 SDC3O75056 442 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 SLC2A3P11169 496 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 RXRGP48443 463 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 SEMG2Q02383 582 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 DLG2Q15700 870 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 C6orf118Q5T5N4 469 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 FBXL19Q6PCT2 694 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 ENOSF1Q7L5Y1 443 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 DSG4Q86SJ6 1040 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 C14orf80Q86SX3 495 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 CREBRFQ8IUR6 639 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 PPP1R13BQ96KQ4 1090 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 PPM1HQ9ULR3 514 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms