RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TAC4Q86UU9 113 aa15.36■□□□□ 0.05
USP47-207ENST00000527733 SNX31Q8N9S9 440 aa15.36■□□□□ 0.05
USP47-207ENST00000527733 SUSD6Q92537 303 aa15.36■□□□□ 0.05
USP47-207ENST00000527733 SLC4A5Q9BY07 1137 aa15.36■□□□□ 0.05
USP47-207ENST00000527733 TRIM15Q9C019 465 aa15.36■□□□□ 0.05
USP47-207ENST00000527733 ERVK-5Q9HDB9 667 aa15.36■□□□□ 0.05
USP47-207ENST00000527733 ZMYND8Q9ULU4 1186 aaPredicted RBP15.36■□□□□ 0.05
USP47-207ENST00000527733 RASSF10A6NK89 507 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 PPFIA2O75334 1257 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 ZNF7P17097 686 aaPredicted RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 L1CAMP32004 1257 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 GBE1Q04446 702 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 TRIM60Q495X7 471 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 PPP1R15BQ5SWA1 713 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 NEPROQ6NW34 567 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 LPIN3Q9BQK8 851 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 BBS2Q9BXC9 721 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 GGT7Q9UJ14 662 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 HNRNPCL1O60812 293 aaKnown RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 CPA3P15088 417 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 PBX3P40426 434 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 CSHL1Q14406 222 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 FNDC3BQ53EP0 1204 aaKnown RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 GPR158Q5T848 1215 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 LRRC34Q8IZ02 419 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 MAGEB18Q96M61 343 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 KCTD15Q96SI1 283 aaPredicted RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 ECT2Q9H8V3 914 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 CASS4Q9NQ75 786 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 ADA2Q9NZK5 511 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 PCDHGB4Q9UN71 923 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 GNEQ9Y223 722 aaKnown RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 H3BQF6 201 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 KDM1AO60341 852 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 HOXB8P17481 243 aaPredicted RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 SCNN1AP37088 669 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 TMEM110Q86TL2 294 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 TMEM175Q9BSA9 504 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 CDYLQ9Y232 598 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 MAST2Q6P0Q8 1798 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 MYADML2A6NDP7 307 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 SYCE1LA8MT33 242 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 MEFVO15553 781 aaPredicted RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 MPOP05164 745 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 TSHRP16473 764 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 INCA1Q0VD86 236 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 KBTBD12Q3ZCT8 623 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 LRRN4Q8WUT4 740 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 SRPK1Q96SB4 655 aaKnown RBP15.35■□□□□ 0.05
USP47-207ENST00000527733 TM6SF2Q9BZW4 377 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 CFAP97Q9P2B7 532 aa15.35■□□□□ 0.05
USP47-207ENST00000527733 PTPRJQ12913 1337 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 H2AFYO75367 372 aaKnown RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 KLHL2O95198 593 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 PCDH8O95206 1070 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 CYP2A6P11509 494 aaPredicted RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 RHOQP17081 205 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 ABCE1P61221 599 aaKnown RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 KDSRQ06136 332 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 MREGQ8N565 214 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 SMG7Q92540 1137 aaKnown RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 ERP27Q96DN0 273 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 RIC8BQ9NVN3 520 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 GRK2P25098 689 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 LRPAP1P30533 357 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 CORO1AP31146 461 aaKnown RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 YBEYP58557 167 aaPredicted RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 TPGS2Q68CL5 300 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 FUKQ8N0W3 1084 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 NETO2Q8NC67 525 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 CXorf38Q8TB03 319 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 RGS18Q9NS28 235 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 ANGPTL2Q9UKU9 493 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 ZNF623O75123 536 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 FAAP100Q0VG06 881 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 C1orf146Q5VVC0 180 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 MLPHQ9BV36 600 aaPredicted RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 TAS2R13Q9NYV9 303 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 PHTF1Q9UMS5 762 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 HBS1LQ9Y450 684 aaKnown RBP15.34■□□□□ 0.05
USP47-207ENST00000527733 INSL6Q9Y581 213 aa15.34■□□□□ 0.05
USP47-207ENST00000527733 TCRBV7S2A1N4TA0A589 114 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 CFAP73A6NFT4 308 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 PRPF4O43172 522 aaKnown RBP eCLIP15.33■□□□□ 0.05
USP47-207ENST00000527733 GPR32O75388 356 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 LRIG2O94898 1065 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 DDX5P17844 614 aaKnown RBP15.33■□□□□ 0.05
USP47-207ENST00000527733 RFC2P35250 354 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 PPP3CCP48454 512 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 PHEXP78562 749 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 CUL3Q13618 768 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 USP45Q70EL2 814 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 SZRD1Q7Z422 152 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 CFAP52Q8N1V2 620 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 CCDC185Q8N715 623 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 LMO3Q8TAP4 145 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 NCLNQ969V3 563 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms