RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ADGRF1Q5T601 910 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 FBXL22Q6P050 247 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 RFWD3Q6PCD5 774 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 GET4Q7L5D6 327 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-203ENST00000527275 PPIL6Q8IXY8 311 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 ZSCAN18Q8TBC5 510 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-203ENST00000527275 SH3RF2Q8TEC5 729 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 AZIN2Q96A70 460 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 USP29Q9HBJ7 922 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 MFHAS1Q9Y4C4 1052 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 ATP1A2P50993 1020 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 ZNF135P52742 658 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-203ENST00000527275 NRG1Q02297 640 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-203ENST00000527275 CHSY1Q86X52 802 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 ZNF683Q8IZ20 524 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 RIN3Q8TB24 985 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 MYLIPQ8WY64 445 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 CPT1BQ92523 772 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 PRCCQ92733 491 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-203ENST00000527275 MYEOVQ96EZ4 313 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 MSLNLQ96KJ4 702 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 ROPN1BQ9BZX4 212 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-203ENST00000527275 ROPN1Q9HAT0 212 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-203ENST00000527275 SAYSD1Q9NPB0 183 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 MPP6Q9NZW5 540 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 SH3BP1Q9Y3L3 701 aa19.27■□□□□ 0.68
SMPD1-203ENST00000527275 SMIM23A6NLE4 172 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 ERCC2P18074 760 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 NRLP54845 237 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 Q6ZNB5 142 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 PGM2Q96G03 612 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 C9orf72Q96LT7 481 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 CDX2Q99626 313 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-203ENST00000527275 CAPS2Q9BXY5 557 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 BCLAF3A2AJT9 711 aaKnown RBP19.26■□□□□ 0.67
SMPD1-203ENST00000527275 CFAP69A5D8W1 941 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 RASGRF2O14827 1237 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 MAP3K6O95382 1288 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 TACR2P21452 398 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 HPDP32754 393 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-203ENST00000527275 NR2C2P49116 596 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 IRAK1P51617 712 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 GBE1Q04446 702 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 CCDC85BQ15834 202 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-203ENST00000527275 ACBD5Q5T8D3 534 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-203ENST00000527275 NCBP2-AS2Q69YL0 99 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 LRRC31Q6UY01 552 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 HTR3DQ70Z44 454 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 TAB3Q8N5C8 712 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-203ENST00000527275 NAT8LQ8N9F0 302 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 EPS8L3Q8TE67 593 aaKnown RBP19.26■□□□□ 0.67
SMPD1-203ENST00000527275 IGSF8Q969P0 613 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 RPRD1AQ96P16 312 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-203ENST00000527275 STOML2Q9UJZ1 356 aa19.26■□□□□ 0.67
SMPD1-203ENST00000527275 HELZP42694 1942 aaKnown RBP19.25■□□□□ 0.67
SMPD1-203ENST00000527275 TRDMT1O14717 391 aaKnown RBP19.25■□□□□ 0.67
SMPD1-203ENST00000527275 DCLK1O15075 740 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 RGS16O15492 202 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-203ENST00000527275 KCNN4O15554 427 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 RBL1P28749 1068 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 HOXC13P31276 330 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 ACTN2P35609 894 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 MAGOHP61326 146 aaKnown RBP19.25■□□□□ 0.67
SMPD1-203ENST00000527275 SLC10A2Q12908 348 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-203ENST00000527275 BBS7Q8IWZ6 715 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 ARFGAP2Q8N6H7 521 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 TLCD1Q96CP7 247 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 TBC1D31Q96DN5 1066 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 LSM7Q9UK45 103 aaKnown RBP19.25■□□□□ 0.67
SMPD1-203ENST00000527275 PRDM4Q9UKN5 801 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 IGLV3-10A0A075B6K4 115 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 F5H5T6 163 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 GOLGA8MH3BSY2 632 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 SHOX2O60902 331 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-203ENST00000527275 XRCC4Q13426 336 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 ANKRD22Q5VYY1 191 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 CENPUQ71F23 418 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 LGI2Q8N0V4 545 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 CFAP52Q8N1V2 620 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 SMRP1Q8NCR6 262 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 PRDM16Q9HAZ2 1276 aa19.25■□□□□ 0.67
SMPD1-203ENST00000527275 NUP205Q92621 2012 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 DOCK8Q8NF50 2099 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 DOCK4Q8N1I0 1966 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 A6NNZ2 444 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 SMAPO00193 183 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 HTR7P34969 479 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 SLCO1A2P46721 670 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 BASP1P80723 227 aaKnown RBP19.24■□□□□ 0.67
SMPD1-203ENST00000527275 TUBB8Q3ZCM7 444 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 ALFQ53S48 1182 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 FAM78AQ5JUQ0 283 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 NETO2Q8NC67 525 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 RTP4Q96DX8 246 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 GDE1Q9NZC3 331 aa19.24■□□□□ 0.67
SMPD1-203ENST00000527275 PPARGC1AQ9UBK2 798 aaKnown RBP19.24■□□□□ 0.67
SMPD1-203ENST00000527275 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 H3BQ06 376 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 ALOX15BO15296 676 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 CNTN5O94779 1100 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms