RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RELTQ969Z4 430 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 NAF1Q96HR8 494 aaKnown RBP7.58□□□□□ -1.2
NEDD8-203ENST00000524927 ZFYVE19Q96K21 471 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 LRGUKQ96M69 825 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 JMJD4Q9H9V9 463 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 IFT122Q9HBG6 1241 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 UBN1Q9NPG3 1134 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 KCMF1Q9P0J7 381 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 DKK3Q9UBP4 350 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 GABBR1Q9UBS5 961 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 PCDHB6Q9Y5E3 794 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 PCDHB2Q9Y5E7 798 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 MED13Q9UHV7 2174 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 PLXND1Q9Y4D7 1925 aa7.58□□□□□ -1.2
NEDD8-203ENST00000524927 PTPRDP23468 1912 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 VPS37CA5D8V6 355 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-203ENST00000524927 MAGEB2O15479 319 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 ADAM12O43184 909 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 ORC4O43929 436 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 DHX16O60231 1041 aaKnown RBP7.57□□□□□ -1.2
NEDD8-203ENST00000524927 NDUFS2O75306 463 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 CER1O95813 267 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 GNSP15586 552 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 C5AR1P21730 350 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 XPAP23025 273 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-203ENST00000524927 SFPQP23246 707 aaKnown RBP eCLIP7.57□□□□□ -1.2
NEDD8-203ENST00000524927 TMOD1P28289 359 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 LIMS1P48059 325 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 GPC3P51654 580 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 GFOD2Q3B7J2 385 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 LINC00303Q3SY05 128 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 CCDC157Q569K6 752 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 MBNL2Q5VZF2 373 aaKnown RBP7.57□□□□□ -1.2
NEDD8-203ENST00000524927 SLC36A4Q6YBV0 504 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 FRMD1Q8N878 549 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 CDYL2Q8N8U2 506 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 KYQ8NBH2 561 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 ZBTB8AQ96BR9 441 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 CLIP3Q96DZ5 547 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 HIST1H2AHQ96KK5 128 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 NOX5Q96PH1 765 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 HIST1H2AJQ99878 128 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 P2RY13Q9BPV8 354 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 FBRSL1Q9HCM7 1045 aaKnown RBP7.57□□□□□ -1.2
NEDD8-203ENST00000524927 SLC9A2Q9UBY0 812 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 TPCN1Q9ULQ1 816 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 PIN4Q9Y237 131 aaKnown RBP7.57□□□□□ -1.2
NEDD8-203ENST00000524927 WNT6Q9Y6F9 365 aa7.57□□□□□ -1.2
NEDD8-203ENST00000524927 MYH6P13533 1939 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 IGKV6D-21A0A0A0MT36 114 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 A0A0A6YYJ9 748 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 GPAA1O43292 621 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 PPFIA2O75334 1257 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 TADA2AO75478 443 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 CYP7B1O75881 506 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 C1SP09871 688 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 IGFBP6P24592 240 aaPredicted RBP7.56□□□□□ -1.2
NEDD8-203ENST00000524927 OR1D2P34982 312 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 ADCY8P40145 1251 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 CLCN3P51790 818 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 TBX4P57082 545 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 ACTR2P61160 394 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 STILQ15468 1287 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 MINDY4Q4G0A6 757 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 KANK2Q63ZY3 851 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 IL27RAQ6UWB1 636 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 USP49Q70CQ1 688 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 CXXC5Q7LFL8 322 aaKnown RBP7.56□□□□□ -1.2
NEDD8-203ENST00000524927 ERC1Q8IUD2 1116 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 LYSMD2Q8IV50 215 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 ARID3BQ8IVW6 561 aaPredicted RBP7.56□□□□□ -1.2
NEDD8-203ENST00000524927 LINC01465Q8N7H1 131 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 CHFRQ96EP1 664 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 SCLT1Q96NL6 688 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 LRRC3BQ96PB8 259 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 ACE2Q9BYF1 805 aaPredicted RBP7.56□□□□□ -1.2
NEDD8-203ENST00000524927 GCOM2Q9BZD3 368 aaPredicted RBP7.56□□□□□ -1.2
NEDD8-203ENST00000524927 PITHD1Q9GZP4 211 aaPredicted RBP7.56□□□□□ -1.2
NEDD8-203ENST00000524927 NAPBQ9H115 298 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 SLITRK6Q9H5Y7 841 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 KCND1Q9NSA2 647 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 MAGEL2Q9UJ55 1249 aa7.56□□□□□ -1.2
NEDD8-203ENST00000524927 FN1P02751 2386 aaKnown RBP7.55□□□□□ -1.2
NEDD8-203ENST00000524927 BCAR3O75815 825 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 AGFG2O95081 481 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 ZRANB2O95218 330 aaKnown RBP eCLIP7.55□□□□□ -1.2
NEDD8-203ENST00000524927 SREBF1P36956 1147 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 GRK6P43250 576 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 DLG4P78352 724 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 CDC42EP1Q00587 391 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 RUNX3Q13761 415 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 GTF2H3Q13889 308 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 TEAD2Q15562 447 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 ASPRV1Q53RT3 343 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 C1QL3Q5VWW1 255 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 FAM160B1Q5W0V3 765 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 GRAMD4Q6IC98 578 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 LSMEM2Q8N112 164 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 MMP21Q8N119 569 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 ELMOD1Q8N336 334 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms