RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 FAM159BA6NKW6 160 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 EIF4E1BA6NMX2 242 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 TRIM49D1C9J1S8 452 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 GOLGA8RI6L899 631 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 TRDMT1O14717 391 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 PER2O15055 1255 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 MCF2LO15068 1137 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 SPINT1O43278 529 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 RFPL1O75677 317 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 FGF18O76093 207 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ERBB2P04626 1255 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 INHBAP08476 426 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CD48P09326 243 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ESRRAP11474 423 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 DARSP14868 501 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ANPEPP15144 967 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 PROZP22891 400 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 GPC1P35052 558 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CPOXP36551 454 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 PGM1P36871 562 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 PEX19P40855 299 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 NDUFV1P49821 464 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CACNA2D1P54289 1103 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 EIF3EP60228 445 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ERVFC1P60507 584 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ACTR3P61158 418 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 YWHAEP62258 255 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 UBE3AQ05086 875 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ZP2Q05996 745 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 BST1Q10588 318 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 SURF1Q15526 300 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CCDC6Q16204 474 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 OCLNQ16625 522 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 HADHQ16836 314 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 KBTBD12Q3ZCT8 623 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 DNAL1Q4LDG9 190 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 RABGAP1LQ5R372 815 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CYP4A22Q5TCH4 519 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 THEMIS2Q5TEJ8 643 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 STEAP4Q687X5 459 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 AAGABQ6PD74 315 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ALYREFQ86V81 257 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 SLC26A11Q86WA9 606 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 RFX6Q8HWS3 928 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 PALM2Q8IXS6 379 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ABI1Q8IZP0 508 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 LINC01465Q8N7H1 131 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 COLGALT1Q8NBJ5 622 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 RBM15BQ8NDT2 890 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 MCUQ8NE86 351 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 FBXO27Q8NI29 283 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 RSAD2Q8WXG1 361 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 TTC17Q96AE7 1141 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 TMEM143Q96AN5 459 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 FAM122AQ96E09 287 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 MRRFQ96E11 262 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CASD1Q96PB1 797 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 PANX3Q96QZ0 392 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 SRPK1Q96SB4 655 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 ZNF184Q99676 751 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 GCOM2Q9BZD3 368 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 WWP1Q9H0M0 922 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CWH43Q9H720 699 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 USP29Q9HBJ7 922 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 C11orf16Q9NQ32 467 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 SMYD2Q9NRG4 433 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 METTL5Q9NRN9 209 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 SAE1Q9UBE0 346 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 SCOCQ9UIL1 159 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CD207Q9UJ71 328 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 CPSF3Q9UKF6 684 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 PLLPQ9Y342 182 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 HCN4Q9Y3Q4 1203 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 C2CD2Q9Y426 696 aa8.03□□□□□ -1.12
SPIDR-223ENST00000524033 HBS1LQ9Y450 684 aaKnown RBP8.03□□□□□ -1.12
SPIDR-223ENST00000524033 COL4A6Q14031 1691 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 KAT6AQ92794 2004 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 A0A0U1RQF3 1178 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 FAM237BA0A1B0GVD1 139 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 SERTM1A2A2V5 107 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 C2orf71A6NGG8 1288 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 SDR42E2A6NKP2 422 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 CXorf49A8MYA2 514 aaPredicted RBP8.02□□□□□ -1.13
SPIDR-223ENST00000524033 ZNF487B1APH4 448 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 SPECC1L-ADORA2AF8WAN1 911 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 K7ERI5 159 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 COPEO14579 308 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 OGTO15294 1046 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 BIRC5O15392 142 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 MBTPS2O43462 519 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 DCXO43602 365 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 CCNT2O60583 730 aaKnown RBP8.02□□□□□ -1.13
SPIDR-223ENST00000524033 MAFO75444 373 aaPredicted RBP8.02□□□□□ -1.13
SPIDR-223ENST00000524033 PIAS1O75925 651 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 EOMESO95936 686 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 GSRP00390 522 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 AVPP01185 164 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 BPGMP07738 259 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 SERPINA6P08185 405 aa8.02□□□□□ -1.13
SPIDR-223ENST00000524033 SNRPAP09012 282 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms